Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0233 ATGGCGAAGAGTGAGATTCGTTTTTCTACTCAGCTTATTGATGGAGATGGCACATTCAATGTTGAGGGAATTGAGAAGTTCATGAAGGACGTTAAGTTAGCTGAATGCGGGCTTTCCTATGCCGTAGTTTCCATCATGGGTCCACAAAGTAGTGGCAAGAGTACACTATTAAATAATTTGTTTGGCACTGATTTTAGAGAGATGGATGCATTTAAGGGAAGATCTCAAACAACCAAAGGAATTTGGTTGGCAAAATGTGCCGGCATAGAGCCTTGTACACTTGTGATGGACTTAGAGGGCACAGATGGAAGAGAAAGGGGAGAGGACGATACTGCATTTGAAAAGCAGAGTTCTCTTTTTGCTTTGGCTGTTTCGGATATTGTGCTGATAAACATGTGGTGTCATGACATCGGCCGTGAGCAAGCTGCAAACAAGCCACTCCTAAAAACTGTGTTTCAGGTCATGATGAGGTTGTTTAGTCCACGCAAAACAACATTGATGTTTGTCATACGTGATAAAACAAGGACACCACTAGAAAATTTAGAACCTGTCTTACGAGAAGATATTCAGAAGATTTGGGATTCTGTTCCTAAGCCACAGGCCCACAAGGAAACCCCACTGAGTGAATTTTTTAATGTTGAAGTTGTTGCTCTTTCTAGCTTCGAAGAGAAGGAAGAGCAATTTAAGGAGCAGGTTCATGAGTTGAGGCAGCGATTTGTTCATTCCATAAATCCTGGTGGGCTTGCGGGGGATCGGCGTGGAGTTGTTCCTGCTTCGGGCTTTTCTTTTAGTGCTCAGCAAATCTGGAAAGTCATCAAGGAGAACAAAGATCTTGACCTTCCCGCACACAAGGTCATGGTAGCTACTGTAAGATGTGAAGAAATTGCCAATGAGAAATATGCCCTTTTTGCTGCCAATGAGGACTGGCGTCAGCTAGAAGAGGCTGTGCAATCAGGTCCAGTTGCTGGATTTGGGAAAAAGCTCAATTCGCTTCTTGATACTTGTCTTTCAGAGTATGATGTTGAAGCCACTTATTTTGATGAAGGTGTGAGAACCGCTAAACAGAAGCACCTTCAAGAAAAACTGCTGCAACTTGTCCAACCAGCATTCCACTCTGCCCTTGGACATATAAGGATTGGAACTTTCGATAAGTTCAAGGAAGCATTTGATAAGGCTTTGAATAAAGGGGAAGGGTTTTCTGAAGCTGCTAATAATTGCACAGGGATTTTTATGGCTCAGTTTGATGAAGCCTGTGCAGATGTTGTTATCGAAGTTGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTACGACGTGACATTGATGCACATGTTGCATCTGTACGTGCAGCTAAGTTATCGGAACTTACTACAACATATGAGGAAAAACTAAAAGAAGCTTTGTCTGGACCTATTGAAGCACTTTTTGATGGAGCTAATAATGAAACTTGGCCATCAATAAGGAAACTCTATAAGCGTGAGACTGAATCAGCTGTTTCTGGGTTTTCTGCTGCGCTTACCAGGTTTGATGCAGATGAAGAAACACAAAAGAACATGATTGTGAGTTTAGAGAATTATGCAAGAGGTTTGATAGAGACAAAAGCTAGGGATGAAGCTTGCAGAGTCTTAATACGTATGAAGGAAAAGTTCACAACATTGTTTAGTCATGATGCTGAATCAATGCCGCGTATTTGGACAGGAAGCGAAGATATTCGATCCATCACCAAGACTGCTCGATATGCTTGCCTGAAGTTGCTATCTGTTATGACCGTAATTCGTTTGGATGATAAAGATGACACTCTTAACATTGAGAATATTTTAGCAAAAGCATTGCTAGATTCACCCAATGAAAAAGAGAAGAAAATCACAACAGTTGATCCACTGGCTTCAAGCACTTGGGAAAAGGTTCCAGCTTCTAAAACATTGATCACCCCTGTCCAGTGTAAATCTTTGTGGAGGCAATTCAAGATTGAGACAGAATATACTGTGTCTCAGGCCATTGCTGCACAGGAGGCCAACAAGCGTGGTAACAACTGGTTACCTCCACCATGGGCAATTGTTGCCTTGCTTATTCTGGGATTTAACGAGTTTATGACACTTCTAAGAAATCCTTTATACTTGATTCTCATTTTTATTGGTTATCTTCTCATTAAAGCCTTGTGGGTGCAACTTGACGTTGCGGGTGATTTTCGCCATGGTGCACTAGCTGGACTCTTATCCTTGTCTACCAAGTTTCTTCCAACTATAATGAATCTTATGAGAAAGTTAGCAGAGGAGGGGGTTCCTGAAACTAACAATCCTCAGCCAACTCCATCAACAAGTAATCAAACTACTGGTAGCTCTGTGTCATCTACTGCTTCATCTAAGGTAACTTTTTTAGAACGTGGAACTGAGTACACTGCTTCATCAAAAGAAGAATAG 2421 0.4164 MAKSEIRFSTQLIDGDGTFNVEGIEKFMKDVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFGTDFREMDAFKGRSQTTKGIWLAKCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSSLFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSFEEKEEQFKEQVHELRQRFVHSINPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYALFAANEDWRQLEEAVQSGPVAGFGKKLNSLLDTCLSEYDVEATYFDEGVRTAKQKHLQEKLLQLVQPAFHSALGHIRIGTFDKFKEAFDKALNKGEGFSEAANNCTGIFMAQFDEACADVVIEVADWDTSKVREKLRRDIDAHVASVRAAKLSELTTTYEEKLKEALSGPIEALFDGANNETWPSIRKLYKRETESAVSGFSAALTRFDADEETQKNMIVSLENYARGLIETKARDEACRVLIRMKEKFTTLFSHDAESMPRIWTGSEDIRSITKTARYACLKLLSVMTVIRLDDKDDTLNIENILAKALLDSPNEKEKKITTVDPLASSTWEKVPASKTLITPVQCKSLWRQFKIETEYTVSQAIAAQEANKRGNNWLPPPWAIVALLILGFNEFMTLLRNPLYLILIFIGYLLIKALWVQLDVAGDFRHGALAGLLSLSTKFLPTIMNLMRKLAEEGVPETNNPQPTPSTSNQTTGSSVSSTASSKVTFLERGTEYTASSKEE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0233 806 Coils Coil 218 238 - -
Ahy18g0233 806 MobiDBLite consensus disorder prediction 763 798 - -
Ahy18g0233 806 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 3 784 - -
Ahy18g0233 806 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Ahy18g0233 806 PANTHER PROTEIN SEY1 3 784 IPR008803 -
Ahy18g0233 806 MobiDBLite consensus disorder prediction 759 806 - -
Ahy18g0233 806 CDD GBP 36 242 - -
Ahy18g0233 806 Hamap Protein SEY1 [SEY1]. 9 761 IPR008803 -
Ahy18g0233 806 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Ahy18g0233 806 Gene3D - 11 246 IPR027417 -
Ahy18g0233 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 277 IPR027417 -
Ahy18g0233 806 Pfam Sey1 three-helix bundle domain 323 759 IPR046758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0233 Ahy-Chr18 1862252 1868865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0233 K22698 - gmx:100777656 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0233 18 1862252 1868865 Ahy8g1022 8 25012849 25019451 hybridization
Ahy18g0233 18 1862252 1868865 Ahy9g0461 9 5859708 5873435 PCT
Ahy9g0461 9 5859708 5873435 Ahy18g0233 18 1862252 1868865 PCT