Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0178 ATGGAACTTATTTCCGGTTTGCCCGAAGACTTGGCCCGAGACTGTTTGATTCGGGTCTCATACCAACAATTCCCAACGGTGGCATCGGTATGCAAAAACTGGAAAGAGGAGGTTGAGTCGCCGGAGTTTCGCCGTCAACGCCGGCGCACCGGCATCTCACAGAAGCTCATCGTGATGGTTCAAGCACGATGTGACCCGGATAATGAACCCGGATCCGGTTCATCAAAGCGATTATATAACCCAGTTTACCGTCTCAGCGTGTTCGAACCGGTAACCGGTAACTGGAGCGAGTTGCGTCCTCCACCGGAGTTTGAATCCGGGCTACCCATGTTTTGTCGGGTCGCTAGCGTTGGGTCGGAGCTTATCCTATTGGGCGGGTTAGACCCAAATACATGGAAGGCTTCTGATTCCGTTTTGATTTATAACTTCATTACCGCGAAGTGGCGCCGGGGAACTCACATGCCTGGTGGGTCCCGCATGCTCTTTGCATGCGTGTCAGACTCGCGGCGAATGGTATTCGTCGCCGGTGGACACGACGACGAGAAAAATGCACTGCGATCCGCGCTGGCGTATGACGTGGCAGAGGATAAGTGGATATCCCTGCCCGACATGGCGGCGGAGCGCGACGAGTGTACGGCCTTGTTCCGCCACGGGCGACTGGCTGTCGTGGGTGGTTATCGGACGGAAACGCAGGGTGTGTTTGAAAGGAGCGCGGAGGTTTTTGACGTTGCCACGTGGCAGTGGGGTCCAGTAATGGAGGACTTTTTGGATTGCGCCACGTGTCCGAGAAACTCGACGGACGGTGGTGATGTGGACGGGAGAGTGATCATGTGTTGCGGCGAGGAGATAAAATCGAGGCAGTGTGGCACGTGGCAGAAGATGGGGAAGGTGCCGGTGGAGATACGGAACGTGGCGTACGTTGGAGCGTTGGATGGATGTGCCGTGGTGATTGGATCCAACGGTCACGGAGAGGCGCATGAGAGTTTCGTGTTTGATTTGAAGAGTTGTAATTGGAGAAAGGTTGAAACCCCAGAAAAATTCAGGGGCCATGTCCAAACAGGTTGTGTTTTGGAGATTTAA 1080 0.5454 MELISGLPEDLARDCLIRVSYQQFPTVASVCKNWKEEVESPEFRRQRRRTGISQKLIVMVQARCDPDNEPGSGSSKRLYNPVYRLSVFEPVTGNWSELRPPPEFESGLPMFCRVASVGSELILLGGLDPNTWKASDSVLIYNFITAKWRRGTHMPGGSRMLFACVSDSRRMVFVAGGHDDEKNALRSALAYDVAEDKWISLPDMAAERDECTALFRHGRLAVVGGYRTETQGVFERSAEVFDVATWQWGPVMEDFLDCATCPRNSTDGGDVDGRVIMCCGEEIKSRQCGTWQKMGKVPVEIRNVAYVGALDGCAVVIGSNGHGEAHESFVFDLKSCNWRKVETPEKFRGHVQTGCVLEI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0178 359 SMART kelc_smart 171 218 IPR006652 GO:0005515
Ahy9g0178 359 SMART kelc_smart 120 169 IPR006652 GO:0005515
Ahy9g0178 359 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 359 - -
Ahy9g0178 359 Pfam Kelch motif 112 155 IPR006652 GO:0005515
Ahy9g0178 359 Pfam Kelch motif 172 204 IPR006652 GO:0005515
Ahy9g0178 359 SUPERFAMILY Kelch motif 80 343 IPR015915 GO:0005515
Ahy9g0178 359 Gene3D - 43 353 IPR015915 GO:0005515
Ahy9g0178 359 SUPERFAMILY F-box domain 3 50 IPR036047 GO:0005515
Ahy9g0178 359 PANTHER OS02G0208700 PROTEIN 1 359 IPR044595 GO:0080037|GO:2000762
Ahy9g0178 359 Pfam F-box domain 4 43 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0178 Ahy-Chr9 1889141 1891091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0178 7 198 Miscellaneous Gene Families AT4G33900 26.066 3.15e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0178 - - gmx:100796602 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0120 18 879742 881326 Ahy9g0178 9 1889141 1891091 PCT
Ahy7g2190 7 80238161 80239747 Ahy9g0178 9 1889141 1891091 PCT
Ahy9g0178 9 1889141 1891091 Ahy18g0120 18 879742 881326 PCT
Ahy9g0178 9 1889141 1891091 Ahy7g2190 7 80238161 80239747 PCT