Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0120 ATGGAGCTTATTTCAGCTCTACCTGAGGACGTAGCCCGAGATTGCTTGATTCGGATCTCTTATCAAAACTTTCCAGCAGTTTCCTCTGTCTCCAAAGCCTGGAATACCGAGATCCAGTCGCCGGAGTTTCGCCGTAGAAGGACCGCCGCTAATCAAACTCAGAAAATACTTGTCGCCGTTCAATCCAGAGTTGACTCCGACGACAAACGTCGAACCGGCTTGCTGGTCAAGGCAGCAACGAACCCGGTTTACCAACTCAGCGTGTTGGAACCCAAAACTGGTAATTGGAGCGAGTTACCACCCGCACCGGAATTCCCAAACGGGTTACCCATGTTCTGTCGTATAGCCGGTGTAGGGTACGACCTTGTTGTTATTGGCGGGTGGGACCCAGAGTCTTGGAAAGCTTCCAATTCAGTTTTTATCTATAACTTTCTATCTGCCACGTGGCGACGTGGGGCCGACATGCCCGGTGGGCCCCGAACGTTCTTTGCGTGTGCATCGGATAACGATCGTACGGTCTACGTTGCTGGCGGCCACGACGACGAGAAGAATGCACTGAAATCCGTGTTGGCGTATGACGTGGCACGCGATGCATGGGCCGCGCTGCCTGATATGTCTAGAGAGCGTGACGAGTGCAAAGCCATCGTTCGGGGAGGACGCCTCTGCATAATTGGCGGCTACTGCACTGAAATGCAGGGCCGCTTTGAGAAGAGCTCAGAGGAGTTTGATGCTGCCACGTGTCAGTGGAGCCCAGTGGAAGAAGAGTTCTTGGATGCTGGCACCTGTCCTAGGACTTGCGTCGATGGCGGTGATGATGAATTGTTCATTTGCCGAGATGGTGAGGTGGTGGTCTTAAAGCGTGACACGTGGCAGACGGTGGTAAAGGTGCCGGAGGAAATACGTAATGTTTCGTATATGGAAGCGCGGGAAGGAGCATTGTTGTTAATTGGATCAAGTGGTTTCGGACAACCACATATGGGTTTTTTGTTGGACTTGAAGAGTAGTAATTGGGCCAAATTATCGAGCCCAGAAAACTACACTGGCCATGTCCAATTTGGTTGCCTTTTGGAAATTTAG 1077 0.5162 MELISALPEDVARDCLIRISYQNFPAVSSVSKAWNTEIQSPEFRRRRTAANQTQKILVAVQSRVDSDDKRRTGLLVKAATNPVYQLSVLEPKTGNWSELPPAPEFPNGLPMFCRIAGVGYDLVVIGGWDPESWKASNSVFIYNFLSATWRRGADMPGGPRTFFACASDNDRTVYVAGGHDDEKNALKSVLAYDVARDAWAALPDMSRERDECKAIVRGGRLCIIGGYCTEMQGRFEKSSEEFDAATCQWSPVEEEFLDAGTCPRTCVDGGDDELFICRDGEVVVLKRDTWQTVVKVPEEIRNVSYMEAREGALLLIGSSGFGQPHMGFLLDLKSSNWAKLSSPENYTGHVQFGCLLEI* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0120 358 PANTHER OS02G0208700 PROTEIN 1 358 IPR044595 GO:0080037|GO:2000762
Ahy18g0120 358 SUPERFAMILY Kelch motif 81 339 IPR015915 GO:0005515
Ahy18g0120 358 SMART kelc_smart 121 169 IPR006652 GO:0005515
Ahy18g0120 358 SMART kelc_smart 172 219 IPR006652 GO:0005515
Ahy18g0120 358 Gene3D - 9 293 IPR015915 GO:0005515
Ahy18g0120 358 Pfam Kelch motif 160 206 IPR006652 GO:0005515
Ahy18g0120 358 Pfam Kelch motif 115 156 IPR006652 GO:0005515
Ahy18g0120 358 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
Ahy18g0120 358 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0120 Ahy-Chr18 879742 881326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0120 4 217 EF-hand Containing Proteins AT4G39560 26.977 5.92e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0120 - - gmx:100817910 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0120 18 879742 881326 Ahy18g0120 18 879742 881326 ECH
Ahy18g0120 18 879742 881326 Ahy7g2190 7 80238161 80239747 hybridization
Ahy18g0120 18 879742 881326 Ahy9g0178 9 1889141 1891091 PCT
Ahy9g0178 9 1889141 1891091 Ahy18g0120 18 879742 881326 PCT