Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2539 ATGTCTAAATTGAAATCTTCTTCATCATCTTCAATGTTACTTCCACTTCTTATATCTTTTCTTCTCCTCATTGTTCCAACATTCTCAACATCAAGAAAAGTTCTTGATGAGAATCACCATGAAGGAATCATCAGAGTCAACCTTCGCCATGTTGACTCCGGCAAGAACCTAACCAAGCTGGAGCGTGTCCAACACGGCATGAAGCGCGCCAAGAGCCGCCTCCAGTGGCTCAACGCAATGGTAACAAAAAAACAATCCCAATTCTCTAAAAGCGAAGAACTAGATTCAGGTTCAGAATCATCTGAATCTGAATCTAGTTCTTCGCAAATCCAGTCTCCAATACACGTGGGGAACGGGGAGTACCTAATGGAACTAGCCATAGGTACTCCTCCAAAGTCGTACCCTGCGATATTGGACACTGGTAGCGACCTCATATGGACACAATGCCAGCCTTGTTCCCAATGTTACAAGCAACCAACACCTATCTTCGACCCCAAGAAATCTTCGAGTTTTTCGAAGCTTTCTTGCGGAAGCAATCTATGCAACGTTCTACCTTCCTCCAGCTGTAGCAGCGGCGGTGGCGGCGACAGCGACGGCTGCCAGTATATGTACTCATACGGAGATTATTCCGTCACACAAGGCGTTTTAGCAACCGAGACTTTCACTTTTGGCAGTTCTAAGATTAAAAGCATTGGATTTGGATGCGGCGAAGATAATCAAGGAAGTGGATTCGAACAAGCTTCCGGTTTAGTCGGACTAGGCCGGGGGCCATTATCGCTTGTTTCGCAGCTCAAAGAGCCGAAATTTTCGTATTGCTTACAATCCATTGATGATAGAAAAAACAGTGTTCTTTTGTTAGGATCATTGCCGAAAACGAAAAACGCGAAAGGAGCTGTAACGACACCGTTGCTTAAGAATCCGATGCAGCCTTCGTTTTACTTCCTTGATCTGCAAGGAATCTCGGTTGGTGGAACTCAATTGAGCATTGAGGAATCGACGTTTGAACTCGGCGATAACGGAAGTGGTGGCATGATCATTGATTCAGGGACAACAATTACATACATTGAAGAAAATGCTTTTGATGCATTGAAGAAGGAGTTTGTTTCACAAATGGATTTGCCAGTGGATAATTCTGGATCAACAGGGCTTGATGTATGCTTCAGTTTGGAGTCTGCTTCGGGTCGAATCGAGGTTCCGAAACTTGTTTTTCACTTCAGAGGTGGGGATTTAGAGCTTCCTGCTGAGAATTACATGATTGGTGATGTGAATTTGGGTGTGGCGTGTTTGGCTATGGGTAGTTCTTCTACTGGCATGTCAATATTTGGAAACGTTCAACAGCAGAATTTGTTGGTGAATCATGATCTTCAGAAGGAGACTATTACTTTTGTTCCTACACAGTGTGATCGGGTTTAA 1413 0.4409 MSKLKSSSSSSMLLPLLISFLLLIVPTFSTSRKVLDENHHEGIIRVNLRHVDSGKNLTKLERVQHGMKRAKSRLQWLNAMVTKKQSQFSKSEELDSGSESSESESSSSQIQSPIHVGNGEYLMELAIGTPPKSYPAILDTGSDLIWTQCQPCSQCYKQPTPIFDPKKSSSFSKLSCGSNLCNVLPSSSCSSGGGGDSDGCQYMYSYGDYSVTQGVLATETFTFGSSKIKSIGFGCGEDNQGSGFEQASGLVGLGRGPLSLVSQLKEPKFSYCLQSIDDRKNSVLLLGSLPKTKNAKGAVTTPLLKNPMQPSFYFLDLQGISVGGTQLSIEESTFELGDNGSGGMIIDSGTTITYIEENAFDALKKEFVSQMDLPVDNSGSTGLDVCFSLESASGRIEVPKLVFHFRGGDLELPAENYMIGDVNLGVACLAMGSSSTGMSIFGNVQQQNLLVNHDLQKETITFVPTQCDRV* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2539 470 Pfam Xylanase inhibitor N-terminal 121 288 IPR032861 -
Ahy8g2539 470 Gene3D Acid Proteases 288 470 IPR021109 -
Ahy8g2539 470 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 136 147 IPR001969 GO:0004190|GO:0006508
Ahy8g2539 470 MobiDBLite consensus disorder prediction 87 112 - -
Ahy8g2539 470 PRINTS Pepsin (A1) aspartic protease family signature 344 355 IPR001461 GO:0004190|GO:0006508
Ahy8g2539 470 PRINTS Pepsin (A1) aspartic protease family signature 127 147 IPR001461 GO:0004190|GO:0006508
Ahy8g2539 470 CDD pepsin_A_like_plant 120 467 IPR034161 -
Ahy8g2539 470 ProSiteProfiles Peptidase family A1 domain profile. 121 463 IPR033121 -
Ahy8g2539 470 Pfam Xylanase inhibitor C-terminal 313 463 IPR032799 -
Ahy8g2539 470 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 344 355 IPR001969 GO:0004190|GO:0006508
Ahy8g2539 470 Gene3D Acid Proteases 95 287 IPR021109 -
Ahy8g2539 470 PANTHER OS07G0603500 PROTEIN-RELATED 17 469 - -
Ahy8g2539 470 PANTHER OS08G0469000 PROTEIN 17 469 - -
Ahy8g2539 470 SUPERFAMILY Acid proteases 113 469 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2539 Ahy-Chr8 48273102 48275026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2539 87 470 Miscellaneous Gene Families AT1G77480 26.316 8.83e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2539 - - adu:107463277 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2821 18 132527030 132528955 Ahy8g2539 8 48273102 48275026 hybridization