Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2821 ATGTCTAAATTGAAATCTTCATCATCATCTTCAATGTTACTTCCTCCACTTCTTCTATCTCTTCTCCTCATTGTTCCAACATTCTCAACATCAAGAAAAGTTCTTGATGAGAATCACCATGAAGGGATCATCAGAGTCAACCTTCGCCATGTTGACTCCGGCAAGAACCTAACCAAGCTGGAGCGTGTCCAACACGGCATGAAGCGCGCCAAGAGCCGCCTCCAGCGGCTCAACGCAATGGTAACAAAAAAACAATCCCAATTCTCTAAAAGCGAAGAACTAGATTCAGATTCAGAATCAGAATCTGAATCTAGTTCTTCGCAAATCCAGTCTCCAATACACGCGGGGAACGGGGAGTACCTAATGGAACTAGCCATAGGTACTCCTCCAAAGTCGTACCCCGCGATATTGGACACTGGTAGCGACCTCATATGGACACAATGCCAGCCTTGTTCCCAATGTTACAAGCAACCAACACCTATCTTCGACCCCAAGAAATCTTCGAGTTTCTCGAAGCTTTCTTGCGGAAGCAATCTATGCAACGTTCTACCTTCCTCCAGCTGTAGCAGCGGCGGCGGCGGCGACAGCGAAGGCTGCCAGTATATGTACTCATACGGCGATTATTCCGTCACACAAGGCGTTTTAGCAACGGAGACTTTTACTTTTGGCAGTTCTAAGATTAAAAGCATTGGATTTGGATGCGGCGAAGATAACCAAGGAAGTGGATTCGAACAAGCTTCCGGTCTAGTCGGACTAGGCCGGGGGCCATTATCGCTTGTTTCGCAGCTCAAAGAGCCGAAATTTTCGTATTGCTTACAATCCATTGATGACAGAAAAAACAGTGTTCTTTTGTTAGGATCATTGCCGAAAACGAAAAACGCGAAAGGAGCTGTAACGACACCGTTGCTTAAGAATCCGATGCAGCCTTCGTTTTACTTCCTTGATCTGCAAGGAATCTCGGTTGGTGGAACTCAATTGAGCATTGAGGAATCGACGTTTGAACTCGGCAATAACGGAAGTGGTGGCTTGATCATTGATTCAGGGACAACAATTACATACATTGAAGAAAATGCTTTTGATGCATTGAAGAAGGAGTTTGTTTCACAAATGGATTTGCCAGTGGATAATTCTGGATCAACGGGGCTTGATGTGTGCTTCAGTTTGGAGTCTGCTACGGGTCGAATCGAGGTTCCGAAACTTGTTTTTCACTTCAGAGGTGGGGATTTAGAGCTTCCTGCTGAGAATTACATGATTGGTGATGTGAATTTGGGTGTGGCGTGTTTGGCTATGGGTAGTTCTTCTACTGGCATGTCAATATTTGGAAATGTTCAACAGCAGAATTTGTTGGTGAATCATGATCTTCAGAAGGAGACTATTACTTTTGTTCCTACACAGTGTGATCAGGTTTAA 1410 0.4475 MSKLKSSSSSSMLLPPLLLSLLLIVPTFSTSRKVLDENHHEGIIRVNLRHVDSGKNLTKLERVQHGMKRAKSRLQRLNAMVTKKQSQFSKSEELDSDSESESESSSSQIQSPIHAGNGEYLMELAIGTPPKSYPAILDTGSDLIWTQCQPCSQCYKQPTPIFDPKKSSSFSKLSCGSNLCNVLPSSSCSSGGGGDSEGCQYMYSYGDYSVTQGVLATETFTFGSSKIKSIGFGCGEDNQGSGFEQASGLVGLGRGPLSLVSQLKEPKFSYCLQSIDDRKNSVLLLGSLPKTKNAKGAVTTPLLKNPMQPSFYFLDLQGISVGGTQLSIEESTFELGNNGSGGLIIDSGTTITYIEENAFDALKKEFVSQMDLPVDNSGSTGLDVCFSLESATGRIEVPKLVFHFRGGDLELPAENYMIGDVNLGVACLAMGSSSTGMSIFGNVQQQNLLVNHDLQKETITFVPTQCDQV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2821 469 PRINTS Pepsin (A1) aspartic protease family signature 343 354 IPR001461 GO:0004190|GO:0006508
Ahy18g2821 469 PRINTS Pepsin (A1) aspartic protease family signature 126 146 IPR001461 GO:0004190|GO:0006508
Ahy18g2821 469 CDD pepsin_A_like_plant 119 466 IPR034161 -
Ahy18g2821 469 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 343 354 IPR001969 GO:0004190|GO:0006508
Ahy18g2821 469 Coils Coil 60 87 - -
Ahy18g2821 469 Gene3D Acid Proteases 94 286 IPR021109 -
Ahy18g2821 469 PANTHER OS08G0469000 PROTEIN 20 468 - -
Ahy18g2821 469 PANTHER OS07G0603500 PROTEIN-RELATED 20 468 - -
Ahy18g2821 469 ProSiteProfiles Peptidase family A1 domain profile. 120 462 IPR033121 -
Ahy18g2821 469 Pfam Xylanase inhibitor C-terminal 312 462 IPR032799 -
Ahy18g2821 469 Pfam Xylanase inhibitor N-terminal 120 287 IPR032861 -
Ahy18g2821 469 MobiDBLite consensus disorder prediction 81 112 - -
Ahy18g2821 469 SUPERFAMILY Acid proteases 112 467 IPR021109 -
Ahy18g2821 469 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 135 146 IPR001969 GO:0004190|GO:0006508
Ahy18g2821 469 Gene3D Acid Proteases 287 469 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2821 Ahy-Chr18 132527030 132528955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2821 86 469 Miscellaneous Gene Families AT1G77480 25.653 2.23e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2821 - - adu:107463277 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2821 18 132527030 132528955 Ahy18g2821 18 132527030 132528955 ECH
Ahy18g2821 18 132527030 132528955 Ahy8g2539 8 48273102 48275026 hybridization