Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2474 ATGGGAACACTATCTCTGTCCCTATCTCTTCTCAAATTCTACAAACCCTTCTTCTTCTTCTCTTCGATTCCACACTCCACTCGACCCATTCTGTTCCGCAGCATTAACAACAAGAAGAAGCTTCCTTCCTCTTCTTCTTTCTTCTGCTTCAGCAGCTCTGTGGGACAATCTCAGCCGTCGACGGCGAACAGCACTTTCGCATCCAAATCGGAGGGCCAGAATCTGAAGGGTCCATCTCCCGAGCTGTGGCTGCACAACACGATGAGCAAGAAGAGAGAGCTTTTGAGACCGAAAGTGGAATCCAAAGTTGGAATGTACGTATGCGGTGTAACCGCTTATGATCTCAGCCATATTGGCCATGCTCGCGTCTACGTCAACTTCGACCTTCTTTTCAGGTACCTTAAGCATTTGGGATACGAAGTGTCTTATGTTCGCAATTTCACTGACGTAGATGACAAGATCATTGCTAGAGCAAATGAATTAGGCGAAGATCCAATCAGTTTAAGTCAACGCTACTGTGAAGAGTTCTGCCAAGACATGATAACGCTTAATTGTCTGACTCCTTCTGTGGAACCAAAAGTCTCAGAGCACATGCCCCAAATCATTGATATGATTGAGAAGATACTTAATAATGGTTATGCCTACATTGTTGATGGGGATGTATACTATAGTGTAGAAAAGTTTCCTGAATATGGAAAATTATCTGGTCGAGATCTAGAAGACAATCGAGCTGGTGAGAGGGTAGCCGTTGATTCAAGGAAGAAACATCCTGCTGATTTTGCTCTCTGGAAGTCTGCAAAGTCAGGAGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGTTGGCACATTGAATGCAGTGCTATGAGTGCAACTTATCTTGGTTACTCTTTTGACATCCATGGTGGAGGGGTTGACCTTGTGTTTCCCCACCATGAAAATGAAATAGCTCAGAGTTGTGCTGCATGTAATAAAAGCGATATAAGCCTATGGGTACACAATGGATTTGTCACTGTTGACTCTGAGAAGATGTCTAAATCTCTGGGAAACTTTTTCACAATACGGCAGGTTGTAGACATTTATCATCCTCTGGCTTTGAGATATTTTTTGATGGGTGCGCATTATCGATCTCCAATTAACTACTCTATCATACAGCTTGAAAGTGCTTCAGACCGTATTTTTTATATATACGAGACATTGCATGAATGTGAAAGCTTTCTGAATCAACATGATCAGACAGTTAGGAAGGATTCCATCCCACCAGATACTGCAAACATTATTGATAACTTCCATAATGTTTTTGTAACCTCAATGTCTGATGATTTACACACCCCGGTTGTATTGTCTGGACTGGCTGATCCATTAAAATCAATCAATGATTTGCTGCATACTCGTCAGGGTAAAAAACGACAGTTCCGAATAGAATCACTTGCAGCTTTGGAGAAGAGCATCAGGAATGTCCTGACTATTTTAGGACTTTTGCCTACAAGTTATTCTAAGGTTCTGCAGCAGCTTAGAGAAAAAGCTTTGAAACGTGCAAACTTGACAGAAGATGAAATCTTGCAGAAAATCGAAGAACGGGCCGCTGCCAGAATACAAAAGGAGTACGCCAAATCGGACGCAATAAGAAAGGATTTGGCTGTTGTTGGGATTACTCTCATGGACAGTCCTAATGGCACAACTTGGAGGCCTACCATTCCCCTTCATCTACAAGAGCAACAAAACAATGCACCATAA 1743 0.4274 MGTLSLSLSLLKFYKPFFFFSSIPHSTRPILFRSINNKKKLPSSSSFFCFSSSVGQSQPSTANSTFASKSEGQNLKGPSPELWLHNTMSKKRELLRPKVESKVGMYVCGVTAYDLSHIGHARVYVNFDLLFRYLKHLGYEVSYVRNFTDVDDKIIARANELGEDPISLSQRYCEEFCQDMITLNCLTPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYYSVEKFPEYGKLSGRDLEDNRAGERVAVDSRKKHPADFALWKSAKSGEPFWESPWGPGRPGWHIECSAMSATYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSDISLWVHNGFVTVDSEKMSKSLGNFFTIRQVVDIYHPLALRYFLMGAHYRSPINYSIIQLESASDRIFYIYETLHECESFLNQHDQTVRKDSIPPDTANIIDNFHNVFVTSMSDDLHTPVVLSGLADPLKSINDLLHTRQGKKRQFRIESLAALEKSIRNVLTILGLLPTSYSKVLQQLREKALKRANLTEDEILQKIEERAAARIQKEYAKSDAIRKDLAVVGITLMDSPNGTTWRPTIPLHLQEQQNNAP* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2474 580 Gene3D HUPs 64 384 IPR014729 -
Ahy8g2474 580 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 422 566 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Ahy8g2474 580 CDD CysRS_core 83 384 IPR032678 -
Ahy8g2474 580 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 81 577 - -
Ahy8g2474 580 TIGRFAM cysS: cysteine--tRNA ligase 83 565 IPR015803 GO:0004817|GO:0005524|GO:0006423
Ahy8g2474 580 PRINTS Cysteinyl-tRNA synthetase signature 301 322 IPR024909 -
Ahy8g2474 580 PRINTS Cysteinyl-tRNA synthetase signature 105 116 IPR024909 -
Ahy8g2474 580 PRINTS Cysteinyl-tRNA synthetase signature 141 150 IPR024909 -
Ahy8g2474 580 PRINTS Cysteinyl-tRNA synthetase signature 270 288 IPR024909 -
Ahy8g2474 580 PANTHER CYSTEINYL-TRNA SYNTHETASE 81 577 IPR024909 -
Ahy8g2474 580 Gene3D - 386 566 - -
Ahy8g2474 580 MobiDBLite consensus disorder prediction 53 75 - -
Ahy8g2474 580 MobiDBLite consensus disorder prediction 53 78 - -
Ahy8g2474 580 SUPERFAMILY Nucleotidylyl transferase 81 390 - -
Ahy8g2474 580 Hamap Cysteine--tRNA ligase [cysS]. 82 567 IPR015803 GO:0004817|GO:0005524|GO:0006423
Ahy8g2474 580 Pfam tRNA synthetases class I (C) catalytic domain 98 391 IPR032678 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2474 Ahy-Chr8 47486854 47491289 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2474 K01883 - gmx:100786700 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2729 18 130753536 130757945 Ahy8g2474 8 47486854 47491289 hybridization