Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2729 ATGGGAACACTATCTCTTCTCAAATTCTACAAACCCTTCTTCTTCTTCTCTTCGATTCCACACTCCACTCGACCCATTCTCTTCCGCAGCATTAACAACAAGAAGCAGCTTCCTTCCTCTTCTTCTTTCTCCTGCTTCAGCAGCTCTGTGGGACAATCTCAGCCGTTGACGGCGAACAGCACTTTCGCATCCAAATCGGAGGGCCAGAATCTGAAGGGTCCATCTCCCGAGGTGTGGCTGCACAACACGATGAGCAAGAAGAGAGAGCTTTTGAGACCGAAAGTGGAATCCAAGGTTGGAATGTACGTATGCGGTGTAACCGCTTATGATCTCAGCCATATTGGCCATGCTCGCGTCTACGTCAACTTCGACCTTCTTTTCAGGTACCTTAAGCATTTGGGATACGAAGTGTCTTATGTTCGCAATTTCACTGACGTAGATGACAAGATCATTGCTAGAGCAAATGAATTAGGCGAAGATCCAATCAGTTTAAGTCAACGCTACTGTGAAGAGTTCTGCCAAGACATGATAACGCTTAATTGTCTGACTCCTTCTGTGGAACCAAAAGTCTCAGAGCACATGCCCCAAATCATTGATATGATTGAGAAGATACTTAATAATGGTTATGCCTACATTGTTGATGGGGATGTTTACTATAGTGTAGAAAAGTTTCCTGAATATGGAAAATTATCTGGTCGAGATCTAGAAGACAATCGAGCTGGTGAGAGGGTAGCCGTTGATTCAAGGAAGAAACATCCTGCTGATTTTGCTCTCTGGAAGTCTGCAAAGTCAGGAGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGTTGGCACATTGAATGTAGTGCTATGAGTGCAACTTATCTTGGTTACTCTTTTGACATCCATGGTGGAGGGGTTGACCTTGTGTTTCCCCACCATGAAAATGAAATAGCTCAGAGTTGTGCTGCATGTAATAAAAGCGATATAAGCCTATGGGTACACAATGGATTTGTCACTGTTGACTCTGAGAAGATGTCTAAATCTCTGGGAAACTTTTTCACAATACGGCAGGTTGTAGACATTTATCATCCTCTGGCTTTGAGATATTTTTTGATGGGTGCGCATTATCGATCTCCAATTAACTACTCTATCATACAGCTTGAAAGTGCTTCAGACCGTATTTTTTATATATACGAGACATTGCATGAATGTGAAAGCTTTCTGAATCAACATGATCAGACAGTTAGGAAGGATTCCATCCCACCAGATACTGCAAACATTATTGATAACTTCCATAATGTTTTTGTAACCTCAATGTCTGATGATCTACACACCCCGGTTGTATTGTCTGGACTGGCTGATCCATTAAAATCAATCAATGATTTGCTGCATACTCGTCAGGGTAAAAAACGACAGTTCCGAATAGAATCACTTGCAGCTTTGGAGAAGAGCATCAGGAATGTCCTGACTATTTTAGGACTTTTGCCTACAAGTTATTCTAAGGTTCTGCAGCAGCTTAGAGAAAAAGCTTTGAAACGTGCGAACTTGACAGAAGATGAAATCTTGCAGAAAATCGAAGAACGGGCCGCTGCCAGAATACAAAAGGAGTACGCCAAATCGGACGCAATAAGAAAGGATTTGGCTGTTGTTGGGATTACTCTCATGGACAGTCCTAATGGCACAACTTGGAGGCCTACCATTCCTCTTCATCTACAAGAGCAACAAAACAATGCACCATAA 1731 0.4281 MGTLSLLKFYKPFFFFSSIPHSTRPILFRSINNKKQLPSSSSFSCFSSSVGQSQPLTANSTFASKSEGQNLKGPSPEVWLHNTMSKKRELLRPKVESKVGMYVCGVTAYDLSHIGHARVYVNFDLLFRYLKHLGYEVSYVRNFTDVDDKIIARANELGEDPISLSQRYCEEFCQDMITLNCLTPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYYSVEKFPEYGKLSGRDLEDNRAGERVAVDSRKKHPADFALWKSAKSGEPFWESPWGPGRPGWHIECSAMSATYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSDISLWVHNGFVTVDSEKMSKSLGNFFTIRQVVDIYHPLALRYFLMGAHYRSPINYSIIQLESASDRIFYIYETLHECESFLNQHDQTVRKDSIPPDTANIIDNFHNVFVTSMSDDLHTPVVLSGLADPLKSINDLLHTRQGKKRQFRIESLAALEKSIRNVLTILGLLPTSYSKVLQQLREKALKRANLTEDEILQKIEERAAARIQKEYAKSDAIRKDLAVVGITLMDSPNGTTWRPTIPLHLQEQQNNAP* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2729 576 Gene3D - 382 562 - -
Ahy18g2729 576 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 77 573 - -
Ahy18g2729 576 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 418 562 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Ahy18g2729 576 Hamap Cysteine--tRNA ligase [cysS]. 78 563 IPR015803 GO:0004817|GO:0005524|GO:0006423
Ahy18g2729 576 SUPERFAMILY Nucleotidylyl transferase 78 386 - -
Ahy18g2729 576 CDD CysRS_core 79 380 IPR032678 -
Ahy18g2729 576 PRINTS Cysteinyl-tRNA synthetase signature 101 112 IPR024909 -
Ahy18g2729 576 PRINTS Cysteinyl-tRNA synthetase signature 266 284 IPR024909 -
Ahy18g2729 576 PRINTS Cysteinyl-tRNA synthetase signature 297 318 IPR024909 -
Ahy18g2729 576 PRINTS Cysteinyl-tRNA synthetase signature 137 146 IPR024909 -
Ahy18g2729 576 PANTHER CYSTEINYL-TRNA SYNTHETASE 77 573 IPR024909 -
Ahy18g2729 576 Pfam tRNA synthetases class I (C) catalytic domain 94 387 IPR032678 -
Ahy18g2729 576 Gene3D HUPs 60 380 IPR014729 -
Ahy18g2729 576 TIGRFAM cysS: cysteine--tRNA ligase 80 561 IPR015803 GO:0004817|GO:0005524|GO:0006423
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2729 Ahy-Chr18 130753536 130757945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2729 K01883 - gmx:100786700 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2729 18 130753536 130757945 Ahy8g2474 8 47486854 47491289 hybridization