LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy8g2441	ATGGTAGACCGCAGTGTTGCTGAAATTACAGAAATGGCATCTCCAAATGGAAATGTTGAAAATTTTGATGAGTTGGATGGCGCTGCAACTGATAACTCATCTGTGGTGGAAATCAGGGAAGTAGCAAATGGCAGCAGCAATGGCAACAATGTGGACAATTCTAATGATGAGGATGTTACTACAGTAGAGGATCAATCAAGGCAATTAAGAGCTCAAAAGGGTCCTGTGAAGGAAAAGTGCACAAAGCCCACAGGTTTGAAAGGTGTTCATACAAACTCGGTGAAAAGATTCAAAGATGGACAAGATGAACATGCATCATCTGCTGTTTCAAATGGTACTTCAGCTTCAGAACCCCACCCTAGGCAGCCTGCCAAAATCAGATCGTATGATGACAAGGAAACTTGGTTGTCCAAGCACCATGGAAAATCTGATCCAGTGTCTTCTGAAGTACCACTGGACAAAGCTAAACCAAGATCATTGAAGAAAGGGCCTGCTGAAAATGTTCAAGGAGGAACAGAATGTTCTTCTCCTACTGCAGAAGATGCTAAACCTCGTAGGGTTGGGGCACTTCCAAATTATGGATTCAGCTTCAAATGTGATGAGCGAGCTGAGAGAAGAAAACAGTTTTACTCAAAGCTCGAGGAAAAGATTCATGCAAAGGAAATGGAGGAGAGTAACCTACAAGCAAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGGAAGAGTCTTGCATTTAAAGCAACTCCAATGCCTAGTTTTTACCAGGAGCCTACTCCTCCTAGGGTAGAGTTAAAGAAGATACCAACTACAAGAGCGAAATCCCCCAAGCTTGGTCGTAGGAAGAGCACCACACATCCAGAGTCAGAAGGAGACGCTATCAGCAGCGCTCAAGTAGGTCGTTTAAGCCTCAATGAGAAAGCGTCTCAGAGTACACCAACTAAAGGAATTTCTCCTGTCAATCAAAAGAAGCCGCAGCGAAAATCTCTTCCTCCTCGACTGGCTTCTGAAAAGAGTAGTCCATCCAATTCATCTACTGTGCGGACTCCATCTAAGATCACAAAAACCTCCTTATCTAGTGTAGCGACTAAAGTTACCACCTTGTCCAATTCAACAGTGAAAGATAAGGTCAAGGTGGCTGAGGCCAATGAAGAAAATAACATCTTTTCCCATGAAACAAGCAAAGTTCCACCTCTGAATGCAGCTCCCAGTCCCATGGACAAGCCAAGTGAAGCCGAGTTGTGCGCAAATGGCAATGTACTCAGAGAAGAGAAACAAGAACAAGAACAAACCTTTGTACACCATAGCAACCGAGAATTAAGTAAGTGGCAGGAGCAGAACTGA	1350	0.4378	MVDRSVAEITEMASPNGNVENFDELDGAATDNSSVVEIREVANGSSNGNNVDNSNDEDVTTVEDQSRQLRAQKGPVKEKCTKPTGLKGVHTNSVKRFKDGQDEHASSAVSNGTSASEPHPRQPAKIRSYDDKETWLSKHHGKSDPVSSEVPLDKAKPRSLKKGPAENVQGGTECSSPTAEDAKPRRVGALPNYGFSFKCDERAERRKQFYSKLEEKIHAKEMEESNLQAKTKETQEAEIKMLRKSLAFKATPMPSFYQEPTPPRVELKKIPTTRAKSPKLGRRKSTTHPESEGDAISSAQVGRLSLNEKASQSTPTKGISPVNQKKPQRKSLPPRLASEKSSPSNSSTVRTPSKITKTSLSSVATKVTTLSNSTVKDKVKVAEANEENNIFSHETSKVPPLNAAPSPMDKPSEAELCANGNVLREEKQEQEQTFVHHSNRELSKWQEQN*	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy8g2441	449	Coils	Coil	210	240	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	335	362	-	-
	Ahy8g2441	449	PANTHER	PROTEIN WVD2-LIKE 4	3	430	IPR044833	GO:0008017
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	386	414	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	123	161	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	104	118	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	291	327	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	1	188	-	-
	Ahy8g2441	449	PANTHER	PROTEIN WVD2-LIKE 5-RELATED	3	430	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	60	77	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	252	362	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	426	449	-	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	426	444	-	-
	Ahy8g2441	449	Pfam	Targeting protein for Xklp2 (TPX2) domain	195	266	IPR027329	-
	Ahy8g2441	449	MobiDBLite	consensus disorder prediction	36	56	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy8g2441	Ahy-Chr8	47115167	47119356	Dispersed/Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy8g2441	-		-	gmx:100804879	493.041

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy18g2690	18	130049780	130054389	Ahy8g2441	8	47115167	47119356	hybridization
	Ahy16g3124	16	147244006	147248687	Ahy8g2441	8	47115167	47119356	PCT
	Ahy6g2428	6	108774683	108779186	Ahy8g2441	8	47115167	47119356	PCT
	Ahy8g2441	8	47115167	47119356	Ahy16g3124	16	147244006	147248687	PCT
	Ahy8g2441	8	47115167	47119356	Ahy6g2428	6	108774683	108779186	PCT