Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2690 ATGGTAGACCGCAGTGTTGCTGAAATTACAGAAATGGCATCTCCAAATGGAAATGTTGAAAATTTTGATGAGTTGGATGGCGCTGCAACTGATAACTCATCTGTGGTGGAAATCAGGGAAGTAGCAAATGGCAGCAGCAATGGCAACAATGTGGACAATTCTAATGATAAGGATGTTACTACAGTAGAGGATCAATCAAGGCAATTAAGAGCTCAAAAGGGTCCTGTGAAGGAAAAGTGCACAAAGCCCACAGGTTCGAAAGGTGTTCATACAAACTCGGTGAAAAGATTCCAAGATGGAAAAGATGAACATGCATCATCTGCTGTTTCAAATGGTACTTCAGCTTCAGAACCCCACCCTAGGCAGCCTGCCAAAATCAGATCGTATGATGACAAGGAAACTCTGTTGTCGAAGCACCCTGGAAAATCTGATCCAGTGTCTTCTGAAGTACCACTGGACAAAGCTAAACCAAGATCATTGAAGAAAGGGCCCGCTGAAAATGTTCAAGGAGGAACAGAATGTTCTTTTCCTACTGCAGAAGATGCTAAACCTCGCAGGGTTGGGGCACTTCCAAATTATGGATTCAGCTTCAAATGTGATGAGCGAGCTGAGAGAAGAAAACAGTTTTACTCAAAGCTCGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAATAACCTACAAGCAAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGGAAGAGTCTTGCATTTAAAGCAACTCCAATGCCTAGTTTTTACCAGGAGCCTACTCCTCCTAGGGTCGAGTTAAAGAAGATACCAACTACAAGAGCGAAATCCCCCAAGCTTGGTCGTAGGAAGAGCGCAACACATCCAGGGTCAGAAGGAGACGCTATCAGCAGTGCTCAAGTAGGTCGTTTAAGCCTCGATGAGAAAGCGTCTCAGAGTACACCAACTAAAGGAATTTCTCCTGTCAATCAAAAGAAGCCGCAGCGAAAATCTCTTCCTCCTCGACTGGCTTCTGAAAAGAGTAGTCAATCCAATTCATCTACTGCGCGGACTCCATCTAAGATCACAAAAACCCCCATATCTAGTGTAGCGACTAAAGTTACCACCTTGTCCAATTCAACAGTGAAAGATAAGGTCAAGGTGGCTGAGGCCAATGAAGAAAACAACATCTTGTCCCATGAAAAAAGCAAAGTTCCACCTCTGAATGCGGCTCCCAGTTCCATGGACAAGCCAAGTGAAGCCGAGTTGTGCACAAATGGCAATGTACTCAGAGAAGAGAAACAAGAACAAGAACGAACCTTTGTACAACAAGAACCCATAGCGACCGAGAATTAA 1335 0.4412 MVDRSVAEITEMASPNGNVENFDELDGAATDNSSVVEIREVANGSSNGNNVDNSNDKDVTTVEDQSRQLRAQKGPVKEKCTKPTGSKGVHTNSVKRFQDGKDEHASSAVSNGTSASEPHPRQPAKIRSYDDKETLLSKHPGKSDPVSSEVPLDKAKPRSLKKGPAENVQGGTECSFPTAEDAKPRRVGALPNYGFSFKCDERAERRKQFYSKLEEKIHAKEVEENNLQAKTKETQEAEIKMLRKSLAFKATPMPSFYQEPTPPRVELKKIPTTRAKSPKLGRRKSATHPGSEGDAISSAQVGRLSLDEKASQSTPTKGISPVNQKKPQRKSLPPRLASEKSSQSNSSTARTPSKITKTPISSVATKVTTLSNSTVKDKVKVAEANEENNILSHEKSKVPPLNAAPSSMDKPSEAELCTNGNVLREEKQEQERTFVQQEPIATEN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2690 444 Coils Coil 210 240 - -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 252 361 - -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 1 180 - -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 304 327 - -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 386 414 - -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 104 118 - -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 123 139 - -
Ahy18g2690 444 Pfam Targeting protein for Xklp2 (TPX2) domain 195 266 IPR027329 -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 57 77 - -
Ahy18g2690 444 PANTHER PROTEIN WVD2-LIKE 5-RELATED 3 430 - -
Ahy18g2690 444 MobiDBLite consensus disorder prediction 335 361 - -
Ahy18g2690 444 PANTHER PROTEIN WVD2-LIKE 4 3 430 IPR044833 GO:0008017
Ahy18g2690 444 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2690 Ahy-Chr18 130049780 130054389 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2690 - - gmx:100804879 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2690 18 130049780 130054389 Ahy8g2441 8 47115167 47119356 hybridization
Ahy16g3124 16 147244006 147248687 Ahy18g2690 18 130049780 130054389 PCT
Ahy6g2428 6 108774683 108779186 Ahy18g2690 18 130049780 130054389 PCT
Ahy18g2690 18 130049780 130054389 Ahy16g3124 16 147244006 147248687 PCT
Ahy18g2690 18 130049780 130054389 Ahy6g2428 6 108774683 108779186 PCT