Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2438 ATGTCTCAAGTCTTTGGCTTTTCAGGTGGTGACGATTTTTGCACTGGGGGGTCAGTATATGCGAACCCAAAGGATGCTAACATCTTCTTGTCGCTCGGTCGATCAGTTGACTTTTACTACCCTCTTCCTAAGAGGTCTCGCATCAGCGTTTCATTTGATCTCGATGGAGATTGGTTTGAGCAGAAGCAGAAGACATCTATTGAAGCCCTGCCAGATGAGTGCCTCTTTGAGATCCTTAGGAGGTTGCCTGCTGGCCAAGCTAGGAGCGCTTGCGCTAACGTGTCAAAGCGCTGGCTTATGCTTCTAAGCAGCATCTCCAATAGTGAGATTTACAGCAACGCAAATGAAAAGGAGCTTAGTGACAAGGAGGGTGATGATCTGGAATTCGGAGATGAGGGATTCCTCTCCCGGAGCTTGGAAGGAAAGAAGGCTACTGATGTTAGACTCGCTGCCATCGCTGTGGGGACATCACATCGCGGTGGATTGGGTAAACTTTCAATCCGTGGAAGCAACTCAGATCGTGGGGTTACTAATCTTGGTCTCAAGGCAGTTGCTCGTGGATGCCCTTCTCTGAAGGCTTTCTCTCTGTGGAACGTTTCTACTGTTAGTGATGAAGGCTTGATCGAGGTTGCTGAGGGGTGTCAAAAGTTAGAGAAGCTTAACCTTTGCAAGTGCTCCGCAATTTCCGACAAGGCTTTAATTGAAGTCGCAAAGAAGTGCCCAAATCTGACCGAATTGTCTATTGAGTCTTGCCCTCAAATTGGCAATGAAGGTCTACAGGCTGTGGGAAAGTTGTGTGCCAATCTAAGGTCGGTCTCAATCAAGGATTGCACCGGAGTCGGTGATCAGGGAATAGCTGGCCTGCTAACTTCTGCTTCCGTTGTTCTGAGAAAGGTGAAGCTCGAGTCGCTGGCGGCTGTATCTGATCTCTCTCTGGCAGTTATTGGGCACTATGGATTTTCGGTCACAGATCTTGTCCTCAATTGCCTTCCAAATGTTAATGAGAAGGGTTTCTGGGTTATGGCCAATGGTCGTGCGCTGCAGAAACTTGCGTCCCTCACAATCGGATCCTGCCGAGGTATAACAGATGCTGCTATTGTAGCTATTGGAAAGGGTTGTCCAAATGTGAGGAACTTCCATCTCAGCAAGTGTGCATTTCTGTCGGACAACGGGTTGGTATCATTAACCAAGGCAGCTCCATCGATCGAGAGCCTACAATTGGAAGAGTGCCACAGGTTTACCCAATTTGGGTTTTTTGGTATCCTTTTTAACTGTGGTGCAAAATTGAAGGCTCTTAATGTCGTTAGCTGCTATGGAATTAAGGATCTGAATCTGGCACTGCCAGCTGGATCTCCTTGCTCCCTTACCTCACTATCAATCTCTGACTGTCCTGGATTTGGAAATGCTAATCTTGCTGTGCTTGGGAGGCTTTGCCCACGTCTTAAGCATGTCGAATTGAGTGGACTGGCAGGAATAACTGACGCAGGGTTTCTTCCACTGCTTGAGAGCTCTGAGGCTGGTTTGGTTAAAGTTAACCTTAGCGGTTGCCTGAATCTGACTGACATAGTAGTCATCTCCTTGGCCAATTCACATGGCTGGACTCTTGAGGTGCTTAACCTTGATGGCTGCCGAAACATCACTGACGCCAGCTTAAAGGCAATTGCAGTCAATTGCCCCTTGCTCTCTGATCTCGACGTTTCCAAGTGCGCCATCACTGATGCCGGGATTGCTGCCCTTGCCCGTGGCAAACAGCTCAATCTGGAGATCCTTTCTCTGTCATGTTGCTCTTCAGTATCAGAGAAGAGCTTGCCTGCGTTGAGGAAACTTGGCAACAGCCTCATCGGACTGAACATCCGGCACTGCAGCGCAATCAGCAGCCGTGCAGTTGGCATGCTTGTTGAACATCTCTGGAGGTGTGACATCCTCTGTTGA 1932 0.4865 MSQVFGFSGGDDFCTGGSVYANPKDANIFLSLGRSVDFYYPLPKRSRISVSFDLDGDWFEQKQKTSIEALPDECLFEILRRLPAGQARSACANVSKRWLMLLSSISNSEIYSNANEKELSDKEGDDLEFGDEGFLSRSLEGKKATDVRLAAIAVGTSHRGGLGKLSIRGSNSDRGVTNLGLKAVARGCPSLKAFSLWNVSTVSDEGLIEVAEGCQKLEKLNLCKCSAISDKALIEVAKKCPNLTELSIESCPQIGNEGLQAVGKLCANLRSVSIKDCTGVGDQGIAGLLTSASVVLRKVKLESLAAVSDLSLAVIGHYGFSVTDLVLNCLPNVNEKGFWVMANGRALQKLASLTIGSCRGITDAAIVAIGKGCPNVRNFHLSKCAFLSDNGLVSLTKAAPSIESLQLEECHRFTQFGFFGILFNCGAKLKALNVVSCYGIKDLNLALPAGSPCSLTSLSISDCPGFGNANLAVLGRLCPRLKHVELSGLAGITDAGFLPLLESSEAGLVKVNLSGCLNLTDIVVISLANSHGWTLEVLNLDGCRNITDASLKAIAVNCPLLSDLDVSKCAITDAGIAALARGKQLNLEILSLSCCSSVSEKSLPALRKLGNSLIGLNIRHCSAISSRAVGMLVEHLWRCDILC* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2438 643 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 16 634 - -
Ahy8g2438 643 Pfam Leucine Rich repeat 558 580 IPR001611 GO:0005515
Ahy8g2438 643 Pfam Leucine Rich repeat 239 262 IPR001611 GO:0005515
Ahy8g2438 643 Pfam Leucine Rich repeat 534 555 IPR001611 GO:0005515
Ahy8g2438 643 Gene3D Ribonuclease Inhibitor 505 642 IPR032675 -
Ahy8g2438 643 Gene3D Ribonuclease Inhibitor 159 236 IPR032675 -
Ahy8g2438 643 PANTHER UNCHARACTERIZED 16 634 - -
Ahy8g2438 643 SMART LRR_CC_2 584 609 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 266 291 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 240 265 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 478 503 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 373 398 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 453 477 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 188 213 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 399 424 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 558 582 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 505 530 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 532 557 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 214 239 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 610 635 IPR006553 -
Ahy8g2438 643 SMART LRR_CC_2 347 372 IPR006553 -
Ahy8g2438 643 SUPERFAMILY RNI-like 209 641 - -
Ahy8g2438 643 Gene3D - 60 108 - -
Ahy8g2438 643 Gene3D Ribonuclease Inhibitor 237 446 IPR032675 -
Ahy8g2438 643 Gene3D Ribonuclease Inhibitor 447 504 IPR032675 -
Ahy8g2438 643 SMART fbox_2 70 111 IPR001810 GO:0005515
Ahy8g2438 643 ProSiteProfiles F-box domain profile. 64 114 IPR001810 GO:0005515
Ahy8g2438 643 SUPERFAMILY F-box domain 63 104 IPR036047 GO:0005515
Ahy8g2438 643 Pfam F-box domain 70 106 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2438 Ahy-Chr8 47093845 47097621 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2438 K14515 - gmx:100820247 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2687 18 130018625 130022334 Ahy8g2438 8 47093845 47097621 hybridization
Ahy16g3123 16 147224485 147228179 Ahy8g2438 8 47093845 47097621 PCT
Ahy6g2427 6 108754187 108757890 Ahy8g2438 8 47093845 47097621 PCT
Ahy8g2438 8 47093845 47097621 Ahy16g3123 16 147224485 147228179 PCT
Ahy8g2438 8 47093845 47097621 Ahy6g2427 6 108754187 108757890 PCT