Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2427 ATGTCTAAAGTCTTCGGCTTTTCCGGAGTTGATAATTTTTGCCCTGGTGGGTCAATATATACCTGTGGCAACCCCAAGGAAGCAAGTTTATTCCTTCCTCTTGGTCCACAAGTTGATGTTTACTTTCCACCTCGGAAGAGATCGCGGATCAGTGCTCCGTTTGTTTTCAATGGAGAATGGCTTGAACAGAAACAGAAGACATCTATTGAATCATTACCAGATGAGTGCCTCTTTGAGATCCTTAGGCGGTTGCCTGCAGGACAAGATAGGAGCGCCTGTGCTTGCGTTTCCAAGCGCTGGCTTATGTGTCTAAGCAATATTTGCAAGAACGAAATTTGCTGCAACAAAAGTGCTGCACCAGAGAGCAGCCTTAGTGTAAAAGAGGGGGATGATGAGGAATTTGGTGGCGAGGGATACCTCTCCCGGAGCTTGGAAGGAAAGAAGGCAACAGATATTAGACTTGCAGCAATTGCAGTTGGAACTGCATCTCGAGGAGGATTGGGGAAGCTTTCGATCCGTGGAAGCAATTCAGACTGTGTGGTGACCAATCTTGGTCTCAAAGCAGTTGGTCATGGATGCCCTTCTTTGAAGTCTCTTTCTCTCTGGAATATTGCTACAATTGATGATGAAGGCTTAATTGAGATTGCAAATGGATGTCAACAGCTGGAGAAGCTTGACCTTTGCAAGTGCCCAGCAATAACAGACAAGGGTTTGATTGCAGTTGTGAGGAAATGCCCAAATCTGACAGAGTTATCGTTGGAATCTTGTCCTAACATTGGTAATGAATGTCTAAGTGCTATTGGGAAAAGCTGCTCCAATCTGAAGTCCATAGCCATCAAGGACTGCAGTAGTGTTGGTGATCAGGGAATCGCTTGCTTGTTTTCTTCGACGACTTTGCTTCTGTCGAAGGTGAAACTACAAGCATTGACTATTTCCGATCTATCGCTTGCTGTTATTGGACATTATGGAAAGGCAGTTACGGATCTTGTCCTCAATTCCCTCCCAAATGTCAGCGAGAGGGGTTTCTGGGTTATGGGCAACGGTAATGGATTGCAGAAGCTGAAGTCACTTACAGTTGGGCCCTGCCTAGGACTAACAGATGTTGGTCTTGAAGCCGTGGGGAAGGGTTGCCCAAATCTGAAAGCCATCCACCTTCGCAAGTCTACACTTTTGTCAGACAATGGGTTGGTATCATTTGTGAAGGCCACTTCATCTCTAGAGAGCCTACAATTGGAAGAGTGCCACAGAATTTCCCAATTGGGTTTTCTTGGTGTTCTTTTCAACTGTGGTGCCATATTGAAGGCAATTTCTTTGACGAGCTGCTTTGGGTTCAAGGATCTGAATATGGTATTGCCCCCATCATCCCCTTGTGAATCTCTTCGGTCCTTATCAATCATTAACTGCCCTGGTTTTGGTAATGCTACCCTCTCTGTCCTGGGAAAGCAGTGTCCTCAGCTTCAACATGTTGAACTGAGTGGACTCGATGGTGTGAGAGATGCCGGGCTTCTCTCATTGCTCGAGAGCAATGAAGGTGGTCTGGTCAAAGTTAATCTCAGTGATTGCGTAAATCTGACTGACAAAGCTGTTTCATCATTGGTAAATCTGCATGGTTGGACTCTTGAGGTTCTAAACCTTGATGGTTGTAAGAATGTCAGTGATCCTAGCATGGTGGCAATTGCTAAAAATTGCCCATTGCTATGTGACCTTGATGTTTCCAAGTGCACGATCACTGATACTGGGATTGCAGCCCTGGCGGAAGCGAAGCAGTTCAATCTGCAGATTCTTTCTTTGTCAGGTTGCAGTTTGGTTTCAGATAGGAGCTTGCCATCTTTGAAAAAATTAGGCAGCACCCTTTTGGGACTAAACATCCAGCACTGCAACTCAATAAGCAGCAGCACAGTCGACATGCTTGTTGAACAACTCTGGAGGTGTGACATCCTCTCATGA 1947 0.4561 MSKVFGFSGVDNFCPGGSIYTCGNPKEASLFLPLGPQVDVYFPPRKRSRISAPFVFNGEWLEQKQKTSIESLPDECLFEILRRLPAGQDRSACACVSKRWLMCLSNICKNEICCNKSAAPESSLSVKEGDDEEFGGEGYLSRSLEGKKATDIRLAAIAVGTASRGGLGKLSIRGSNSDCVVTNLGLKAVGHGCPSLKSLSLWNIATIDDEGLIEIANGCQQLEKLDLCKCPAITDKGLIAVVRKCPNLTELSLESCPNIGNECLSAIGKSCSNLKSIAIKDCSSVGDQGIACLFSSTTLLLSKVKLQALTISDLSLAVIGHYGKAVTDLVLNSLPNVSERGFWVMGNGNGLQKLKSLTVGPCLGLTDVGLEAVGKGCPNLKAIHLRKSTLLSDNGLVSFVKATSSLESLQLEECHRISQLGFLGVLFNCGAILKAISLTSCFGFKDLNMVLPPSSPCESLRSLSIINCPGFGNATLSVLGKQCPQLQHVELSGLDGVRDAGLLSLLESNEGGLVKVNLSDCVNLTDKAVSSLVNLHGWTLEVLNLDGCKNVSDPSMVAIAKNCPLLCDLDVSKCTITDTGIAALAEAKQFNLQILSLSGCSLVSDRSLPSLKKLGSTLLGLNIQHCNSISSSTVDMLVEQLWRCDILS* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2427 648 Gene3D Ribonuclease Inhibitor 449 648 IPR032675 -
Ahy6g2427 648 PANTHER EIN3-BINDING F-BOX PROTEIN 1 19 639 - -
Ahy6g2427 648 Gene3D Ribonuclease Inhibitor 140 242 IPR032675 -
Ahy6g2427 648 Gene3D Ribonuclease Inhibitor 243 448 IPR032675 -
Ahy6g2427 648 SUPERFAMILY RNI-like 317 644 - -
Ahy6g2427 648 Gene3D - 62 113 - -
Ahy6g2427 648 SUPERFAMILY RNI-like 178 339 - -
Ahy6g2427 648 SMART LRR_CC_2 351 376 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 457 482 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 563 587 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 589 614 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 403 428 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 377 402 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 193 218 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 271 296 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 219 244 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 537 562 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 483 508 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 245 270 IPR006553 -
Ahy6g2427 648 SMART LRR_CC_2 510 535 IPR006553 -
Ahy6g2427 648 SMART fbox_2 72 113 IPR001810 GO:0005515
Ahy6g2427 648 Pfam F-box domain 70 108 IPR001810 GO:0005515
Ahy6g2427 648 PANTHER UNCHARACTERIZED 19 639 - -
Ahy6g2427 648 SUPERFAMILY F-box domain 64 105 IPR036047 GO:0005515
Ahy6g2427 648 Pfam Leucine Rich repeat 568 585 IPR001611 GO:0005515
Ahy6g2427 648 Pfam Leucine Rich repeat 244 267 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2427 Ahy-Chr6 108754187 108757890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2427 K14515 - gmx:100819226 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3123 16 147224485 147228179 Ahy6g2427 6 108754187 108757890 hybridization
Ahy6g2427 6 108754187 108757890 Ahy18g2687 18 130018625 130022334 PCT
Ahy6g2427 6 108754187 108757890 Ahy8g2438 8 47093845 47097621 PCT
Ahy18g2687 18 130018625 130022334 Ahy6g2427 6 108754187 108757890 PCT
Ahy8g2438 8 47093845 47097621 Ahy6g2427 6 108754187 108757890 PCT