Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2417 ATGAGTAGGCCAGGAGATTGGAACTGCAGGACATGCAACCACCTCAACTTCCAAAGAAGGGAATCATGCCAACGGTGCGGCGAGCCCAGGGGTGTCGGTGCCGGTGGAGACTATGGCGGAGCCTTTGGGGGTAGAGGCTCCTCCTCTTTTGGCTTCACCACCGGCCCCGACGTTCGCCCCGGAGACTGGTACTGCACCGTTGGCAATTGTGGAGCCCACAACTTCGCAAGCAGGTCTAGCTGCTTCAAGTGTGGTGCTCCCAAGGAGGACTCCTCCGCCGCCGGATTTGACGCCGACATTCCTCGAACTAGAGGCTATAGCTTTGCCGGCACCACTGCTGCTCGCCCTGCTTGGAAATCCGGCGACTGGATATGTACTAGGTCTGGATGCAATGAGCATAACTTTGCAAATAGAATGGAATGCTATCGATGCAATGCACCAAGGGACTCTTCTAGTTCTAGGCCTCCCTATTCATCCTAG 480 0.5604 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRGVGAGGDYGGAFGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAAGFDADIPRTRGYSFAGTTAARPAWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSSRPPYSS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2417 159 Pfam Zn-finger in Ran binding protein and others 59 90 IPR001876 -
Ahy8g2417 159 Pfam Zn-finger in Ran binding protein and others 119 148 IPR001876 -
Ahy8g2417 159 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Ahy8g2417 159 ProSitePatterns Zinc finger RanBP2-type signature. 63 84 IPR001876 -
Ahy8g2417 159 SUPERFAMILY Ran binding protein zinc finger-like 55 91 IPR036443 -
Ahy8g2417 159 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Ahy8g2417 159 ProSiteProfiles Zinc finger RanBP2 type profile. 59 90 IPR001876 -
Ahy8g2417 159 ProSitePatterns Zinc finger RanBP2-type signature. 123 144 IPR001876 -
Ahy8g2417 159 SUPERFAMILY Ran binding protein zinc finger-like 114 151 IPR036443 -
Ahy8g2417 159 SUPERFAMILY Ran binding protein zinc finger-like 2 31 IPR036443 -
Ahy8g2417 159 ProSiteProfiles Zinc finger RanBP2 type profile. 119 150 IPR001876 -
Ahy8g2417 159 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 152 - -
Ahy8g2417 159 SMART zf_4 121 147 IPR001876 -
Ahy8g2417 159 SMART zf_4 61 87 IPR001876 -
Ahy8g2417 159 SMART zf_4 5 29 IPR001876 -
Ahy8g2417 159 Gene3D - 113 151 - -
Ahy8g2417 159 Gene3D - 2 32 - -
Ahy8g2417 159 Gene3D - 54 91 - -
Ahy8g2417 159 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Ahy8g2417 159 PANTHER ZINC FINGER PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2417 Ahy-Chr8 46806876 46808589 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2417 - - gmx:100811107 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2653 18 129407210 129408903 Ahy8g2417 8 46806876 46808589 hybridization