Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2653 ATGAGTAGGCCAGGAGATTGGAACTGCAGGACATGCAACCACCTCAACTTCCAAAGAAGGGAATCATGCCAACGGTGCGGCGAGCCCAGGGGCGTCGGCGCCGGTGCCGGTGGAGACTATGGTGGAGCCTTTGGTGGTAGAGGCTCCTCCTCTTTCGGCTTCACCACCGGCCCCGATGTTCGCCCTGGAGACTGGTACTGCACCGTTGGCAATTGTGGAGCCCACAACTTCGCAAGCCGGTCTAGCTGCTTCAAGTGTGGTGCTCCCAAGGAGGACTCCTCCGCCGCCGGATTTGACGCCGACATTCCTCGAACTAGAGGCTATAGCTTTGCCGGCACCACTGCTGCTCGCCCTGCTTGGAAATCCGGCGACTGGATATGTACCAGGTCTGGATGCAATGAGCATAACTTTGCAAATAGAATGGAATGCTATCGATGCAATGCACCAAGGGACTCTTCTAGTTCTAGGCCTCCCTATTCATCCTAG 486 0.5658 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRGVGAGAGGDYGGAFGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAAGFDADIPRTRGYSFAGTTAARPAWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSSRPPYSS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2653 161 Gene3D - 56 93 - -
Ahy18g2653 161 Gene3D - 2 32 - -
Ahy18g2653 161 Gene3D - 115 153 - -
Ahy18g2653 161 PANTHER ZINC FINGER PROTEIN 1 153 - -
Ahy18g2653 161 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Ahy18g2653 161 ProSitePatterns Zinc finger RanBP2-type signature. 65 86 IPR001876 -
Ahy18g2653 161 SUPERFAMILY Ran binding protein zinc finger-like 57 93 IPR036443 -
Ahy18g2653 161 SUPERFAMILY Ran binding protein zinc finger-like 2 31 IPR036443 -
Ahy18g2653 161 ProSiteProfiles Zinc finger RanBP2 type profile. 61 92 IPR001876 -
Ahy18g2653 161 ProSitePatterns Zinc finger RanBP2-type signature. 125 146 IPR001876 -
Ahy18g2653 161 SUPERFAMILY Ran binding protein zinc finger-like 116 153 IPR036443 -
Ahy18g2653 161 SMART zf_4 63 89 IPR001876 -
Ahy18g2653 161 SMART zf_4 123 149 IPR001876 -
Ahy18g2653 161 SMART zf_4 5 29 IPR001876 -
Ahy18g2653 161 PANTHER BNAA03G57490D PROTEIN 1 153 - -
Ahy18g2653 161 ProSiteProfiles Zinc finger RanBP2 type profile. 121 152 IPR001876 -
Ahy18g2653 161 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Ahy18g2653 161 Pfam Zn-finger in Ran binding protein and others 121 150 IPR001876 -
Ahy18g2653 161 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Ahy18g2653 161 Pfam Zn-finger in Ran binding protein and others 61 92 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2653 Ahy-Chr18 129407210 129408903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2653 - - gmx:100811107 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2653 18 129407210 129408903 Ahy18g2653 18 129407210 129408903 ECH
Ahy18g2653 18 129407210 129408903 Ahy8g2417 8 46806876 46808589 hybridization