Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2333 ATGGCCGTTCCCTTCTTCAAAACAACATTTGTTCCATCTCTTTCCGCTAGAACCACCACTCGCATCACTCCTTCAAAGTCCACAATAGCCTTCATTCGCTTCCTCACATTCTCAACAATGAACTCATCGCCATCGATCTACCGCGTGCCAGACCTAGGTGCAAACGATATGGACCGTGTGGCAGACCACACTTTCCGAACCTACAATGCAAATGTGGCCAAGAGAAGTGGTAAAGGGACGGCAATTGTGTGGTTCAGAAATGATCTGAGGGTCTTAGACAATGAAGTTCTCTACAAAGCGTGGCTCTCTTCGGAAACTCTCTTACCCGTTTTCTGTGTTGATCCTCGCCTCTTTTCCACCACTTACCACTTTGGTTTTCCCAAAACTGGAGCATTGAGAGCTCAATTTTTCGTCGAATGCTTGGCCGACTTGAGGAAGAACTTGACAAAATTTGGACTTAATTTGCTTATACAACACGGAAAGCCTGAAGATATTCTTCCTTCTCTAGCTAAAGCTTTCAAAGCTCATACAGTGTATGCCCAGAAAGAAACCTGCAGTGAGGAGCTGAATGTTGAAAGATTAGTCAGCAAAGGTCTTCGACAAGTAGCAATGCCATCCGGGGAATCCAGTAGTTCAACGAATTCAAACAACTTCCCCAAGTTACAATTGATTTGGGGTACCACCTTGTACCACATAGACGACCTTCCTTTTGATGCCGGTAGTTTGCCAGACGTGTATACTCAATTTCGTAAGACTGTCGAGGCGAAGTGTTCGATACGTCCGTGCATCAAACTTCCTGTGTTGCTTGGACCTCCTCCACTTGTTGAGGATTGGGGGTGTGTTCCTTCATTAGAGAAGCTGGGACTTAGCTCACAGAATGTTAGCAAGGGGATGAAATTTGTAGGAGGTGAAACTGCGGCGTTGAGCAGAGTATATGAATACTTTTGGAAGAAGGATTTGCTAAAGGTATATAAAGAGACCAGAAATGGAATGTTAGGACCTGATTACTCCACTAAGTTCTCACCGTGGCTTGCATTTGGAAGCTTGTCTCCTCGTTTAATACATGAAGAGGTGAAGAGATATGAGAATGAAAGGATAGCAAATGGTTCTACATACTGGGTCTTGTTCGAGTTGATATGGAGGGATTACTTCCGGTTTTTATCGGTGAAATATGGGAATTCAATTTTCTATTTAGGTGGCCCTAGGAAGGTTCAGCAGAAGTGGAGCCAAGACAAGATTTTGTTTGAATCATGGAGAGACGGCCGTACCGGATATCCTTTGATTGATGCCAATATGAAAGAACTATCAACAACAGGGTTTATGTCAAACCGAGGACGGCAGATTGTGTGTTCATTTCTTGTTCGTGATATGGGCATAGATTGGCGAATGGGGGCAGAGTGGTTTGAGACGTGTCTTCTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTATGGCTCAGGAGTTGGGAATGATCCAAGAGAAGATCGATATTTCAGCATTCCGAAACAAGCACAAACATATGATCCGGAAGGAGAATACGTTGCATACTGGTTGCCACGACTGCAAACAATTCCGAAAGAGAAAAGGAACTTTCCTGGAAATTTATACATCCGTCAAATTGTGCCTCTCAAGTATGGTAGACTCCAGAATGACGGCGCAAGAAGCAGCAATGATAGAAGGAATGACAGAAGATGGAACAGGAACTAA 1713 0.4384 MAVPFFKTTFVPSLSARTTTRITPSKSTIAFIRFLTFSTMNSSPSIYRVPDLGANDMDRVADHTFRTYNANVAKRSGKGTAIVWFRNDLRVLDNEVLYKAWLSSETLLPVFCVDPRLFSTTYHFGFPKTGALRAQFFVECLADLRKNLTKFGLNLLIQHGKPEDILPSLAKAFKAHTVYAQKETCSEELNVERLVSKGLRQVAMPSGESSSSTNSNNFPKLQLIWGTTLYHIDDLPFDAGSLPDVYTQFRKTVEAKCSIRPCIKLPVLLGPPPLVEDWGCVPSLEKLGLSSQNVSKGMKFVGGETAALSRVYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLAFGSLSPRLIHEEVKRYENERIANGSTYWVLFELIWRDYFRFLSVKYGNSIFYLGGPRKVQQKWSQDKILFESWRDGRTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPRLQTIPKEKRNFPGNLYIRQIVPLKYGRLQNDGARSSNDRRNDRRWNRN* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2333 570 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 78 278 IPR036155 -
Ahy8g2333 570 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 298 536 IPR036134 -
Ahy8g2333 570 Pfam DNA photolyase 81 260 IPR006050 -
Ahy8g2333 570 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 397 551 - -
Ahy8g2333 570 PRINTS DNA photolyase signature 482 496 IPR002081 -
Ahy8g2333 570 PRINTS DNA photolyase signature 423 439 IPR002081 -
Ahy8g2333 570 PRINTS DNA photolyase signature 443 461 IPR002081 -
Ahy8g2333 570 PANTHER CRYPTOCHROME DASH 67 547 - -
Ahy8g2333 570 TIGRFAM crypto_DASH: cryptochrome, DASH family 80 522 IPR014133 GO:0003913|GO:0006281
Ahy8g2333 570 PANTHER CRYPTOCHROME 67 547 IPR002081 -
Ahy8g2333 570 MobiDBLite consensus disorder prediction 555 570 - -
Ahy8g2333 570 Pfam FAD binding domain of DNA photolyase 376 531 IPR005101 -
Ahy8g2333 570 Gene3D - 227 396 - -
Ahy8g2333 570 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 79 212 IPR006050 -
Ahy8g2333 570 Gene3D HUPs 44 226 IPR014729 -
Ahy8g2333 570 MobiDBLite consensus disorder prediction 551 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2333 Ahy-Chr8 45652789 45659287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2333 K25656 - gmx:100783312 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2554 18 127323154 127329163 Ahy8g2333 8 45652789 45659287 hybridization