Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2012 ATGGCTTCATCCTCGCACGGCGAGCAAATGAGGATCGTGGCGACCCAGTTCTGTTCTGATGATCAGACTCTCATTGCTCATATACGAAAGACTGTGACTATAATGAAGGAGATTGCAGTTGAATTCGAGAAACACAACGAATCTGATAAGGTGAAGGAGTTGGAAGATGCTGTTTTGGAGTTAGCTGATCTCTCTGAGGATAGTGTGCATCTTTCATCAGCAGTTCAAGCTATTGCAAACAGATACCAGCCAAAAGAAGAAGTTGTGAATAATTTTCGTAAGTTACTTGAGGATGAAGTGTCAAAATTGAAGGGCCAGTCTACTACTTCAGATCCTAATAGTAATCCTTTGGTTCGCCAATTTAAGGAAGCTGTATGGAAAGTTCATCATGAAGGGCAGCCAATGCCAGGAGAAGAGCAGGAGGACATTGTAATGACAAGTACCCAATCCAGTATTTTGAATATTACTTGCCCATTGACTGGAAAACCTGTTACTGAGCTTGAAGAACCAGTTCGCAGTGTGGAATGCAAGCATATTTATGAAAAGAGAATAATAATGCAATATATAAAGTCATCCAATCGATGTCCAATATCAGGTTGCCCGAAGAAATTGCGTGCAGATAGGGTGGTGCAGGATGCCTTGTTACTGATTGAGATTGAGGAATTGCGCAAAATGAACAAAGAAACTGAAGTGGAAGACTTTACTCTCCTTAATGAAGACGATTGA 726 0.4105 MASSSHGEQMRIVATQFCSDDQTLIAHIRKTVTIMKEIAVEFEKHNESDKVKELEDAVLELADLSEDSVHLSSAVQAIANRYQPKEEVVNNFRKLLEDEVSKLKGQSTTSDPNSNPLVRQFKEAVWKVHHEGQPMPGEEQEDIVMTSTQSSILNITCPLTGKPVTELEEPVRSVECKHIYEKRIIMQYIKSSNRCPISGCPKKLRADRVVQDALLLIEIEELRKMNKETEVEDFTLLNEDD* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2012 241 ProSiteProfiles Zinc finger SP-RING-type profile. 139 224 IPR004181 GO:0008270
Ahy8g2012 241 SUPERFAMILY RING/U-box 156 204 - -
Ahy8g2012 241 CDD SPL-RING_NSE2 155 221 IPR004181 GO:0008270
Ahy8g2012 241 PANTHER UNCHARACTERIZED 10 229 IPR026846 GO:0000724|GO:0019789|GO:0030915
Ahy8g2012 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 235 IPR013083 -
Ahy8g2012 241 Pfam Zinc-finger of the MIZ type in Nse subunit 141 200 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2012 Ahy-Chr8 40204206 40208405 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2012 K22756 - gmx:100804379 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1404 18 26815236 26819315 Ahy8g2012 8 40204206 40208405 hybridization