Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1947 ATGACCTACGCCGCCGGCCACCACCATAACGACACCGCCGACCTCTTCTACGAGTCCCTTGACAGGTTACTATCTTCCTCCGAATGCTCTACCTCCACCACCTCCGACACCGAGCAAGAACCGCCGCAACACCACCACCACAAGCCCGACGACGGAATTTACAATTATGCCCTCGCACTTAACAACAACTACGACCTCTGGATCTCTCATCCTTCCTCCGTCTCCGAGCGCCGTTCCTCCCTCCTCCGCCACCTCGGTCTCGCCGCTCCCTCGCCGCCGCGCGATAATGGGGACTCTTCCCGCTCCCCGTCGTCGGATCAGTTGACTGGACTGCGTCAGGGCTCCGCCGGAGGGATGCCCCGATCGAGCTCTGACGGTGCCGCGGATCCTCAGAATTCCGTTGGTGATGGTATTGATGATGATGATGAAAAGCCTTGTGGTTCTTGTTCGCTTTCTCGTTCTTCTTGTCGTTGTTGTCGTTCTTGTTCGTCTTCTTCTTCCATTCTTTCTATTCGTTCGGCCGTACCGGAGGCCGGAAAATCTGTAAATAGCCGGAATCGTCGCGGAGGCAGTGTTGGTGGTGGCGGTGGAAATGGCGGGTCCCCCTGGAAGCCTCCTTCGGGGAGGAATGGAAAAAGCGTGGATTTTGGGCAGAATGGGTCCATGGTACCGGAGAATGTCGCCGGTGAGGTGGTTGCCGTGGCGGCAGAGGCAGTGGCTAGTGGGGATTATAATGAGGTCAATGAGGAGGCTTGCACCATAAGGGATCTTGACAATGGGAAAGAGTTTGTGGTGAAAGAGTTTAGAGAAGATGGCATGTGGAACAAGTTCAGGGAGGTCGGCACTGGCCGGCAACTGACAATGGAGGAGTTCGAAATGACGGTCGGTCACTCGCCGATTGTCCAAGAGCTCATGAGGAGGCAGAATGTGGAGGAAAGCCATGGAAAGGACAATGTGGATTCAATTGGCAATGAAGGTGGCAAGGGAAACAATGGTTCCAAGTTGAAGAAGAGAGGGAACTGGTTGAGGGCCTTAAAATCCGCGATGGGGACACATAAGGAGCGGCGAAGCAGCGACGAGAGGGACACATCTTCGGAGAAGGGGGGGAGGAGGTCAAGCTCCGCCACGGATGACAGCCAGGATAATGCCTCATTCCATGGACCTGAGAGAGTTAAGGTTAGGCAGTATGGGAAGCCATGTAAGGAGGTCACAGCTCTTTACAAGAGCCAGGAGATTCAGGCTCATAATGGATCTATATGGAGTATTAAGTTTAGCTTAGATGGGAAATATTTAGCAAGTGCCGGCGAGGATTGTGTGATCCATGTGTGGCAGGTTGTGGAGTCTGAGAGGAAGGGGGAGCTGCTGATGGAAAAACATGAGGATGGGAATATGAACATGTTGTTTGTTGTCAATGGATCTTCGCTGGAGCCGAATCTGCTGTCCCCTCTCATGGACAAGTCACCTCTCTTGGACAATCATCATCCAGAGAGGAAGAGGAAGGGGAGGACATCCATTACCCGGAAATCGTTGAGCTTGGATCAATTAGTTATCCCGGATACCGTGTTTGCGCTCACCGAGAAACCCATTTGCTCCTTTCAGGGACATCTTCATGATGTGCTTGACCTCTCTTGGTCCAAATCTCAGCACTTGCTCTCATCTTCAATGGACAAAACGGTGCGGTTGTGGCATTTGTCTAGCAACTCTTGTTTGAAAGTTTTTTCACACAGTGACTTTGTAACTTGCATCCAGTTTAATCCTGTTGATGATAATTACTTCATTAGCGGATCCTTGGATGCTAAGGTTCGCATATGGAGCATTCCTGATAGGCAGGTTGTTGATTGGACTGATATGCATGAGATGGTTACTGCTGCTTGTTATACACCCGATGGTCAGAGTGCACTGGTTGGTTCTTACAAGGGCAGTTGCCACTTATATAACACATCAGAAAATAAGTTGCAACAAAAAAGTCAGATCAATCTGCAGAACAAGAAGAAGAAATCACATCTCAAAAAAATTACAGGTTTCCAGTTTGCCCCAGGAAGTTCATCAGAGGTACTTATCACATCTGCTGATTCACGAATTCGAGTTGTTGATGGTGTTGATCTGGTTCACAAGTTTAAAGGGTTCCGTAATTCGTCAAGCCAAATTTCAGCCTCTCTGACAGCCAACGGTAAATATATTGTCTCCGCGAGTGAGGATTCCCACGTGTACATATGGAAAAATGAAGCGGATTGTAGGCCTAACAGAAGCAAAGGTGTAACTATAACAGGCGCATACGAACATTTCCACTGTAAAGATGTTTCAGTGGCCATTCCATGGCCGGGTATGGGCGATGCCTGGGACATGCACGATACACTTTCTGGAGAGCAAACTGAGATTGATAACAATGTGGATGAGGCCTTGTCCGCCAATCATCCTCCAACCCCCGTCGAGGAAAACTTTGGCTCCGAGGGTTCACGATCCACATCGGTTTACAGCAATAGTCCACGCCAGGCAACCATTGCAGGTGCCACAAACAGCTACTTTTTCGATAGAATTTCTGCAACATGGCCGGAGGAAAAACTTGTCGTGGCAGCCACAAAGAATCGAAGCCCTCGTATCAGCGGAGATTACTCAAACACAGGAAGTCAAAACATGTCAGCCTGGGGTATGGTGATTGTAACTGCCGGCCTTCGAGGCGAAATTAGAACTTTCCAAAATTTTGGATTGCCACTTCGGATATAA 2724 0.4974 MTYAAGHHHNDTADLFYESLDRLLSSSECSTSTTSDTEQEPPQHHHHKPDDGIYNYALALNNNYDLWISHPSSVSERRSSLLRHLGLAAPSPPRDNGDSSRSPSSDQLTGLRQGSAGGMPRSSSDGAADPQNSVGDGIDDDDEKPCGSCSLSRSSCRCCRSCSSSSSILSIRSAVPEAGKSVNSRNRRGGSVGGGGGNGGSPWKPPSGRNGKSVDFGQNGSMVPENVAGEVVAVAAEAVASGDYNEVNEEACTIRDLDNGKEFVVKEFREDGMWNKFREVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEESHGKDNVDSIGNEGGKGNNGSKLKKRGNWLRALKSAMGTHKERRSSDERDTSSEKGGRRSSSATDDSQDNASFHGPERVKVRQYGKPCKEVTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLMEKHEDGNMNMLFVVNGSSLEPNLLSPLMDKSPLLDNHHPERKRKGRTSITRKSLSLDQLVIPDTVFALTEKPICSFQGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLSSNSCLKVFSHSDFVTCIQFNPVDDNYFISGSLDAKVRIWSIPDRQVVDWTDMHEMVTAACYTPDGQSALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSHLKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGFRNSSSQISASLTANGKYIVSASEDSHVYIWKNEADCRPNRSKGVTITGAYEHFHCKDVSVAIPWPGMGDAWDMHDTLSGEQTEIDNNVDEALSANHPPTPVEENFGSEGSRSTSVYSNSPRQATIAGATNSYFFDRISATWPEEKLVVAATKNRSPRISGDYSNTGSQNMSAWGMVIVTAGLRGEIRTFQNFGLPLRI* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1947 907 MobiDBLite consensus disorder prediction 95 130 - -
Ahy8g1947 907 MobiDBLite consensus disorder prediction 27 50 - -
Ahy8g1947 907 MobiDBLite consensus disorder prediction 807 827 - -
Ahy8g1947 907 SUPERFAMILY WD40 repeat-like 407 742 IPR036322 GO:0005515
Ahy8g1947 907 MobiDBLite consensus disorder prediction 174 216 - -
Ahy8g1947 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 532 566 - -
Ahy8g1947 907 MobiDBLite consensus disorder prediction 486 505 - -
Ahy8g1947 907 MobiDBLite consensus disorder prediction 309 393 - -
Ahy8g1947 907 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 9 907 - -
Ahy8g1947 907 MobiDBLite consensus disorder prediction 86 144 - -
Ahy8g1947 907 Pfam WD domain, G-beta repeat 702 740 IPR001680 GO:0005515
Ahy8g1947 907 Pfam WD domain, G-beta repeat 527 562 IPR001680 GO:0005515
Ahy8g1947 907 Pfam WD domain, G-beta repeat 411 443 IPR001680 GO:0005515
Ahy8g1947 907 Pfam WD domain, G-beta repeat 568 605 IPR001680 GO:0005515
Ahy8g1947 907 PANTHER WD REPEAT DOMAIN 44 9 907 IPR040324 -
Ahy8g1947 907 Gene3D - 351 475 IPR015943 GO:0005515
Ahy8g1947 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 532 572 IPR001680 GO:0005515
Ahy8g1947 907 MobiDBLite consensus disorder prediction 174 188 - -
Ahy8g1947 907 Gene3D - 510 759 IPR015943 GO:0005515
Ahy8g1947 907 PRINTS G protein beta WD-40 repeat signature 431 445 IPR020472 -
Ahy8g1947 907 PRINTS G protein beta WD-40 repeat signature 550 564 IPR020472 -
Ahy8g1947 907 PRINTS G protein beta WD-40 repeat signature 592 606 IPR020472 -
Ahy8g1947 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 572 606 - -
Ahy8g1947 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 412 453 IPR001680 GO:0005515
Ahy8g1947 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 572 606 IPR001680 GO:0005515
Ahy8g1947 907 MobiDBLite consensus disorder prediction 348 374 - -
Ahy8g1947 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 412 445 - -
Ahy8g1947 907 SMART WD40_4 525 563 IPR001680 GO:0005515
Ahy8g1947 907 SMART WD40_4 405 444 IPR001680 GO:0005515
Ahy8g1947 907 SMART WD40_4 653 698 IPR001680 GO:0005515
Ahy8g1947 907 SMART WD40_4 699 740 IPR001680 GO:0005515
Ahy8g1947 907 SMART WD40_4 566 605 IPR001680 GO:0005515
Ahy8g1947 907 SMART WD40_4 607 646 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1947 Ahy-Chr8 39102549 39108634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1947 529 698 Miscellaneous Gene Families AT5G08390 25.143 2.46e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1947 K20241 - pvy:116142805 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1292 18 23299895 23306019 Ahy8g1947 8 39102549 39108634 hybridization