Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1524 ATGGCAACTCTGGACTCCGACGTACCAATGGTTCCGGCCGGCGAGCCTTCCAGCAGCGCGGGTCCTTCCTCCAAGAAGCCCAAGCGCTTCGAGATCAAGAAATGGAACGCTGTTGCTCTCTGGGCTTGGGATATAGTTGTTGATAACTGCGCTATTTGCCGGAACCATATCATGGATCTCTGCATTGAGTGCCAGGCTAATCAGGCTAGCGCCACTAGCGAGGAATGCACTGTAGCGTGGGGAGTTTGCAACCATGCTTTTCACTTCCATTGCATAAGCAGATGGCTCAAGACCCGTCAAGTTTGCCCTCTAGATAATAGCGAGTGGGAGTTTCAGAAATATGGCCACTAG 351 0.5214 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1524 116 Pfam RING-H2 zinc finger domain 48 106 IPR024766 GO:0008270
Ahy8g1524 116 CDD mRING-H2-C3H2C2D_RBX1 48 109 - -
Ahy8g1524 116 SUPERFAMILY RING/U-box 28 113 - -
Ahy8g1524 116 ProSiteProfiles Zinc finger RING-type profile. 61 106 IPR001841 -
Ahy8g1524 116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 116 IPR013083 -
Ahy8g1524 116 MobiDBLite consensus disorder prediction 1 28 - -
Ahy8g1524 116 PANTHER RING BOX 1 116 - -
Ahy8g1524 116 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RBX1 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1524 Ahy-Chr8 32047076 32048860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1524 K03868 - gmx:100789570 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0741 18 8181832 8183614 Ahy8g1524 8 32047076 32048860 hybridization
Ahy8g1524 8 32047076 32048860 Ahy13g1421 13 18037177 18039518 PCT
Ahy13g1421 13 18037177 18039518 Ahy8g1524 8 32047076 32048860 PCT