Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1518 ATGGGTTCTGTAAACAAAGAGTCCCATGAACCACTCCTAGCTCCTCTTCATCACCACCGATCATTCACCGAAGCTGGTGCCGGAGATGGAGAACTTGAAAGGATACTCTCCGACACCTCCCAGCCACTCCTCAAGCGCCTTGGACCCGCCACGTGGATCGAGCTCAAGCTCCTGTTCTTCTTGGCTGCTCCGGCCGTCGTCGTCTACCTCATCAACTACCTGATGTCTATGTCCACGCAAATCTTCTCCGGCCACCTCGGCACCCTGGAGCTGGCTGCCGCTTCCCTTGGCAACACCGGCATCCAAATCTTCGCTTATGGCCTCATGTTGGGAATGGGGAGTGCTGTTGAGACGCTATGCGGGCAAGCATTCGGTGCTCAGAGATTCGAGATGCTTGGGGTGTACCTTCAAAGATCAACGGTGCTGCTTTCACTAGCAGGCGTGGTGTTAACGGTGATCTACGTGTTCAGCGAACCAATCCTGGTGTTCCTGGGAGAATCACCAAGAATCGCATCAGCGGCAGCGCTCTTCGTGTACGGACTAATCCCTCAAATCTTCGCGTACGCGGTGAACTTCCCGATTCAGAAGTTCCTTCAGGCGCAGAGCATCGTGGCGCCGAGCGCCTACATCTCGGCTGCGACGCTGGTTCTGCACCTGATAGTGAGCTGGGTGGTGGTGTACAAGGTGGGGCTGGGGCTTCTTGGAGCGTCGTTGGTTCTGAGCTTGTCGTGGTGGATAATTGTGATAGCGCAGTTTGTGTACATTGTGAAGAGTGAGAGGTGCAAGGACACGTGGCGGGGTTTCAGTACGCAAGCGTTCTCCGGGCTGCCGCAGTTCTTTAAGCTTTCGGCGGCGTCGGCGGTGATGCTCTGCCTTGAGACTTGGTATTTCCAGATCCTCGTCTTGCTTGCTGGCTTGCTCCCTCACCCTGAGCTCGCCCTCGATTCTCTCTCCATCTGTACCACAATATCCGGGTGGGTGTTCATGATATCTGTTGGATTCAACGCAGCTGCCAGCGTGAGGGTGAGCAATGAACTGGGAGCATCAAATCCAAGATCAGCATCATTCTCAGTGGTGGTTGTGACAATTATTTCATTCATAATATCAGTGATTGCGGGACTTGTGATACTTGCACTGAGGGATGTGATTAGCTATGCCTTCACTGAAGGGGAAGAGGTGGCTGCTGCTGTATCTGATCTTTGCCCTCTCCTTTCATTTGCCATTGTCTTGAATGGCATTCAGCCCGTACTCTCAGGGGTGGCTGTTGGATGTGGATGGCAAACATTTGTGGCATATGTCAATGTTGGTTGCTATTATGGAGTTGGTATCCCATTGGGTGCCCTTCTCGGTTTCTATTTCAATTTTGGTGCTAAGGGAATATGGCTGGGAATGTTAGGTGGAACCGCAATGCAAACAATTATTTTGGTGTGGGTCACATTTCGAACCAATTGGCATAAAGAGGTAGAAGAAGCAGCTAAGAGGTTGAGCAAATGGGAGGTGGAGAAGAATAAGCCAATTCTTGACTGA 1527 0.5193 MGSVNKESHEPLLAPLHHHRSFTEAGAGDGELERILSDTSQPLLKRLGPATWIELKLLFFLAAPAVVVYLINYLMSMSTQIFSGHLGTLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAQRFEMLGVYLQRSTVLLSLAGVVLTVIYVFSEPILVFLGESPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISAATLVLHLIVSWVVVYKVGLGLLGASLVLSLSWWIIVIAQFVYIVKSERCKDTWRGFSTQAFSGLPQFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTISGWVFMISVGFNAAASVRVSNELGASNPRSASFSVVVVTIISFIISVIAGLVILALRDVISYAFTEGEEVAAAVSDLCPLLSFAIVLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGVGIPLGALLGFYFNFGAKGIWLGMLGGTAMQTIILVWVTFRTNWHKEVEEAAKRLSKWEVEKNKPILD* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1518 508 Pfam MatE 286 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy8g1518 508 Pfam MatE 64 224 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy8g1518 508 TIGRFAM matE: MATE efflux family protein 64 461 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy8g1518 508 CDD MATE_eukaryotic 54 490 IPR045069 GO:0042910|GO:1990961
Ahy8g1518 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 494 - -
Ahy8g1518 508 PANTHER PROTEIN DETOXIFICATION 14 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1518 Ahy-Chr8 31949926 31954229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1518 K03327 - gmx:100801718 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0735 18 8068776 8073266 Ahy8g1518 8 31949926 31954229 hybridization
Ahy8g1518 8 31949926 31954229 Ahy13g1411 13 17838483 17855766 PCT
Ahy13g1411 13 17838483 17855766 Ahy8g1518 8 31949926 31954229 PCT