Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1486 ATGGAGTTTCAGTCTCCTCTAATTCCAAAGCTCTACCTTCTTTTATGCTTATCTTTCATCCTCTTACTTTCTTTTTTTCACGCTCATGCTAGTGGTTACAACTTCAGATTCTGTGCTGAAGATGCAAACTATCCTGTAAAGATCTCTAGACTTGAAATAACACCAAATCCTATTGTGCGTGCAAGACGGGCTAAGTTTAAGATCTTCGCTGCTTCTGATCATGTTATCTGTGGTGGGAAGTGGGTAATAAAAGTTTCATATATGGGACTTATTGTCCATAAGAAAATGTATGATCTTTGTGAGGCAATGTCCTGTCCTGTTGATGCTACCAAATTTACTCTTTCTCGCACCCAAAGGATGCCCTTATTTGCTCCACAGGGCATCTACACCGTCGAGATATCATTAAGGAACAGAATAAATGAGCCATTCACTTGTATCACCTTTAATTTGAAAATCGTTTCTACATTTTTGGGATCTAGTCTCTGA 486 0.3868 MEFQSPLIPKLYLLLCLSFILLLSFFHAHASGYNFRFCAEDANYPVKISRLEITPNPIVRARRAKFKIFAASDHVICGGKWVIKVSYMGLIVHKKMYDLCEAMSCPVDATKFTLSRTQRMPLFAPQGIYTVEISLRNRINEPFTCITFNLKIVSTFLGSSL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1486 161 SUPERFAMILY E set domains 33 153 IPR014756 -
Ahy8g1486 161 SMART pgtp_13 35 150 IPR003172 -
Ahy8g1486 161 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 10 153 IPR039670 -
Ahy8g1486 161 Gene3D - 34 156 - -
Ahy8g1486 161 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 10 153 - -
Ahy8g1486 161 Pfam ML domain 33 152 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1486 Ahy-Chr8 31296357 31298999 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1486 - K09186 adu:107461992 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0690 18 7207777 7210465 Ahy8g1486 8 31296357 31298999 hybridization
Ahy8g1486 8 31296357 31298999 Ahy13g1349 13 16613354 16617596 PCT
Ahy13g1349 13 16613354 16617596 Ahy8g1486 8 31296357 31298999 PCT