Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0690 ATGGAGTTTCAGTCTCCTCCAATTCCAAAGCTCTACCTTCTTTTATGCTTATCTTTCATCCTCTTACTTTCTTCTTTTCACGCTCATGCTAGTGGTTACAACTTCAGATTCTGTGCTGAAGATGCAAACTATCCTGTAAAGATCTCCAGACTTGAAATAACACCAAATCCTATTGTGCGTGCAAGACGGGCTAAGTTTAAGATCTTCGCTGCTTCTGATCATGTTATCTGTGGTGGGAAGTGGGTAATAAAAGTTTCATATATGGGACTTATTGTCCATAAGAAAATGTATGATCTTTGTGAGGCAATGTCCTGTCCTGTTGATGCTACCAAATTTACTCTTTCTCGCACCCAAAGGATGCCCTTATTTGCCCCACAGGGCATCTACACCGTCGAGATATCATTAAGGAACAGAATAAATGAACCATTCACTTGTATCACCTTTAATTTGAAAATTGTTTCTACATTTTTGGGATCTAGCTAG 483 0.3913 MEFQSPPIPKLYLLLCLSFILLLSSFHAHASGYNFRFCAEDANYPVKISRLEITPNPIVRARRAKFKIFAASDHVICGGKWVIKVSYMGLIVHKKMYDLCEAMSCPVDATKFTLSRTQRMPLFAPQGIYTVEISLRNRINEPFTCITFNLKIVSTFLGSS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0690 160 Pfam ML domain 33 152 IPR003172 -
Ahy18g0690 160 SMART pgtp_13 35 150 IPR003172 -
Ahy18g0690 160 Gene3D - 34 156 - -
Ahy18g0690 160 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 11 153 IPR039670 -
Ahy18g0690 160 SUPERFAMILY E set domains 33 153 IPR014756 -
Ahy18g0690 160 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 11 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0690 Ahy-Chr18 7207777 7210465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0690 - - adu:107461992 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0690 18 7207777 7210465 Ahy18g0690 18 7207777 7210465 ECH
Ahy18g0690 18 7207777 7210465 Ahy8g1486 8 31296357 31298999 hybridization
Ahy18g0690 18 7207777 7210465 Ahy13g1349 13 16613354 16617596 PCT
Ahy13g1349 13 16613354 16617596 Ahy18g0690 18 7207777 7210465 PCT