Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1339 ATGCCATCATTGCTTTCCTCTTCTCTCCTTCAAATGCCTCCTCTTCTATTCTCTCTTATACTCTCACTCATGCTTTGTGGAATCATTGCTGATGAGTCTCCACCTTCACCTGGCTACTACCCTAGTTCCCAAGTTAGTTCTGTTGCCTTTGATCAAGCTTATAGAAACCTTTGGGGACCTCAGCACCAAAGACTAGACCAATCTGGCTCACTAACTATTTGGCTTGACTCTTACTCTGGAAGTGGATTCAAGTCAATCCGGCCATATCGATCCGGATACTTTGGTGCTGCCATTAAGCTTCAATCTGGTTACACTGCAGGAGTGATTACATGTCTCTATCTTTCAAACAACCAAGACTACCCAGGAGACCATGATGAAGTGGACATTGAGTTCCTTGGTACCATCCCAGATAAGCAATATGTGCTGCAGACAAATGTGTTCATGCGAGGAAGCGGAGACAAGAATAATGTGATAGGAAGAGAGATGAGGTTTCACCTTTGGTTCGATCCAACACAAGATTTTCACCACTATGCTATTCTATGGACACCCACTGACATCATATTTTTGGTGGACGATGTTCCAATAAGGAATTACCCAAGAAAGAATGATGCAACATTCCCTGAAAGAGCAATGTACGTGTACGGATCGATATGGGACGCATCATCATGGGCCACAGAGAATGGGAAATACAAAGCTGATTACAAATACCAACCATTCATTGGAAGATACAAAGATTTCAAGCTCCAAGGTTGCACCACTCAATCCTCCTCCTCATGCCAGCCACCCTCACCTTCACCACCTGGCTACAATTCACTAAGCCCTCAACAGTATAATGCAATGCAATGGGTCCAAAACAATTACTTGGTCTATGACTATTGCCGTGATCCCACTAGAGACCATACCCTTACTCCAGAATGCTAA 921 0.4387 MPSLLSSSLLQMPPLLFSLILSLMLCGIIADESPPSPGYYPSSQVSSVAFDQAYRNLWGPQHQRLDQSGSLTIWLDSYSGSGFKSIRPYRSGYFGAAIKLQSGYTAGVITCLYLSNNQDYPGDHDEVDIEFLGTIPDKQYVLQTNVFMRGSGDKNNVIGREMRFHLWFDPTQDFHHYAILWTPTDIIFLVDDVPIRNYPRKNDATFPERAMYVYGSIWDASSWATENGKYKADYKYQPFIGRYKDFKLQGCTTQSSSSCQPPSPSPPGYNSLSPQQYNAMQWVQNNYLVYDYCRDPTRDHTLTPEC* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1339 306 Pfam Glycosyl hydrolases family 16 51 235 IPR000757 GO:0004553|GO:0005975
Ahy8g1339 306 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 270 306 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Ahy8g1339 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 15 306 - -
Ahy8g1339 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 15 306 IPR044791 GO:0004553
Ahy8g1339 306 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 306 IPR013320 -
Ahy8g1339 306 Gene3D - 30 306 - -
Ahy8g1339 306 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 29 243 IPR000757 GO:0004553|GO:0005975
Ahy8g1339 306 PIRSF EndGlu_transf 15 306 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1339 Ahy-Chr8 29429388 29431003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1339 19 306 Glycoside Hydrolase AT3G44990 66.441 2.62e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1339 K08235 - gmx:100796768 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0532 18 5146944 5148589 Ahy8g1339 8 29429388 29431003 hybridization
Ahy8g1339 8 29429388 29431003 Ahy13g0286 13 2895231 2896622 PCT
Ahy13g0286 13 2895231 2896622 Ahy8g1339 8 29429388 29431003 PCT