Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0286 ATGGAAGTTCCCTGCCATGGACAAAATACAAGGATTTCACCCATTTTTGTGTCCCAATATGTAACTCCCCAATCAACAAACTTGTTACCTTTTTGGTACTGTAGGGCCTCACTAAATCTCTTTATATATCCAACTTTGTTAGCTACACTCTTCCATAAGCACCAGCTACTAAAGAGTATAGAGTATAAGCCTCTAATCTTTTGTCACACCCTGCATTGTAGCAGATATACACTAATGTTCACTACAATGCTGCCATCATCACCCCTTTCTTTCTTCTTCCTTCTTGTACTCTCATTCATGATATGTGCTAGTGCTCAGGGTCCACCTTCACCTGGCTACTACCCTGGTTCCAAAATTAGTCCTATTAGCTTCGATCAAGGGTTCAGAAACCTATGGGGACCTCAGCATCAGAGGCTAGAACAAGGCACATTATCAATATGGCTAGATTCTAACTCGGGGAGTGGATTCAAGTCACTTCACTCTTATCAATCTGGATACTTTAGTGCTGCAATTAAGCTTCAACCCGGTTATACTGCAGGGGTCATTACAACTCTCTATCTTTCAAACAACCAAGATCACCCCGGAAATCACGACGAAATCGACATTGAGTTCCTAGGTACCACCCCTGATAAGCCATATGTTCTGCAGACAAATGTATACATAAGAGGAAGTGGTGATGGCAACATTGTAGGGAGAGAGATGAAGTTTCATCTTTGGTTTGATCCAACACAAGATTTTCACATCTATGCTATTCTATGGAAACAAAGTGAGATAATCAACAAGAAAGGGATAATAAAGATGGGCCATCCCTTGATTCAATTTATGAACACCTTGACACTAATGTAA 846 0.4066 MEVPCHGQNTRISPIFVSQYVTPQSTNLLPFWYCRASLNLFIYPTLLATLFHKHQLLKSIEYKPLIFCHTLHCSRYTLMFTTMLPSSPLSFFFLLVLSFMICASAQGPPSPGYYPGSKISPISFDQGFRNLWGPQHQRLEQGTLSIWLDSNSGSGFKSLHSYQSGYFSAAIKLQPGYTAGVITTLYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDGNIVGREMKFHLWFDPTQDFHIYAILWKQSEIINKKGIIKMGHPLIQFMNTLTLM* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0286 281 Pfam Glycosyl hydrolases family 16 125 258 IPR000757 GO:0004553|GO:0005975
Ahy13g0286 281 Gene3D - 104 260 - -
Ahy13g0286 281 SUPERFAMILY Concanavalin A-like lectins/glucanases 123 259 IPR013320 -
Ahy13g0286 281 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 91 259 - -
Ahy13g0286 281 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 103 281 IPR000757 GO:0004553|GO:0005975
Ahy13g0286 281 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 91 259 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0286 Ahy-Chr13 2895231 2896622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0286 87 259 Glycoside Hydrolase AT2G36870 69.942 5.14e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0286 K08235 - gmx:100781528 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0286 13 2895231 2896622 Ahy13g0286 13 2895231 2896622 ECH
Ahy18g0532 18 5146944 5148589 Ahy13g0286 13 2895231 2896622 PCT
Ahy8g1339 8 29429388 29431003 Ahy13g0286 13 2895231 2896622 PCT
Ahy13g0286 13 2895231 2896622 Ahy18g0532 18 5146944 5148589 PCT
Ahy13g0286 13 2895231 2896622 Ahy8g1339 8 29429388 29431003 PCT