Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1272 ATGTCAGCATGGATCATGCAACTAATTATGTCTTGTTATATGAATAAACATACACAGGTATCAGCAGAAGAAGTTAGGAAAATGTTCACAAGGCAACATGAGGGTCCAATTGTGAATCTGGATCAGCAAGACACAGGTTTGTGGAGCAAGTTCCTTCAATTGAAGGATGAGGACAAATTGCAACACCTGAAGGGAATGGTGCTAGACCAGCAAGAAGAAGATTTTGATGATGAAGATAATGATGGACAAGAAGAGGAGAAGCAAAGAGTATGGTCATGGAGGAAGCTCTTAGACTCAGTTGTTTGTGATGAGTTAAAGAAAGCATGGAACCCCAACAAGGGTATGGGTAAGAAGCCCCCTCATATTTGCAACCTCTATGACAGAGCACCAGATTTCATCAACAGCCATGGTTGGAGTGTTGCTGTTGATGGCTCAGATTATTCTCCACTCAAAATGTCTGGTGTTGGCATTTATCATGTTAATCTCTCAGCGGGAGCGATGATGACGCCACACATGAATCCAATGGCAACAGAGTATGGCATAGTGTTGAGAGGGAGTGGAAGAATCCAGATAGTGTTTCCAAACGGAACCAATGCAATGGATGCAGAGATCAAAGAAGGGGATGTGTTCTTTATCCCAAGGTACTTCCCTTTCTGCCAAATAGCATCAAAGGACCAACCATTGGAGTTCTTTGGCTTCACCACCTCTGCAAGTAAGAACAGGCCACAGTTTCTTGTGGGAGCCACGTCACTCATGAGGACCATGATGGGTCCTGAGCTCGCTGCTGCCTTTGGTGTGAGCGAGGAAACCATGCGCCACATGGTTGATGCACAGCATGAGGATGTCATACTTCCATATCCACATCATCAAGATCATAACAAGGAAGTGGTTGAGGTTGACACCATTCCAAAGCTTATAAGGAATGCCATGGTTTTGGGATGGTAA 945 0.4444 MSAWIMQLIMSCYMNKHTQVSAEEVRKMFTRQHEGPIVNLDQQDTGLWSKFLQLKDEDKLQHLKGMVLDQQEEDFDDEDNDGQEEEKQRVWSWRKLLDSVVCDELKKAWNPNKGMGKKPPHICNLYDRAPDFINSHGWSVAVDGSDYSPLKMSGVGIYHVNLSAGAMMTPHMNPMATEYGIVLRGSGRIQIVFPNGTNAMDAEIKEGDVFFIPRYFPFCQIASKDQPLEFFGFTTSASKNRPQFLVGATSLMRTMMGPELAAAFGVSEETMRHMVDAQHEDVILPYPHHQDHNKEVVEVDTIPKLIRNAMVLGW* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1272 314 PANTHER OS03G0336100 PROTEIN-RELATED 19 293 - -
Ahy8g1272 314 Gene3D Jelly Rolls 115 287 IPR014710 -
Ahy8g1272 314 CDD cupin_7S_vicilin-like_C 130 280 - -
Ahy8g1272 314 Coils Coil 68 88 - -
Ahy8g1272 314 Pfam Cupin 124 271 IPR006045 -
Ahy8g1272 314 PANTHER OS03G0336100 PROTEIN 19 293 - -
Ahy8g1272 314 SUPERFAMILY RmlC-like cupins 107 285 IPR011051 -
Ahy8g1272 314 SMART Cupin_1_3 123 272 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1272 Ahy-Chr8 28340082 28342065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1272 82 284 Miscellaneous Gene Families AT2G18540 37.850 1.17e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1272 - - ahf:112706768 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0463 18 4111000 4113604 Ahy8g1272 8 28340082 28342065 hybridization
Ahy8g1272 8 28340082 28342065 Ahy13g0376 13 3765543 3768228 PCT
Ahy13g0376 13 3765543 3768228 Ahy8g1272 8 28340082 28342065 PCT