Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0376 ATGGGGAGAAACATAGGATCCCTGTTGCTGTTGGCTCTTGTTATTGTTGTTCATCATGGAGTTGTTGTGGCCACACCCAAATCAATGGAGCTCTACAAGGATCAGGATGAAGAATATTGGGATGAGAGACGACCTTCTTCTTCTTCTTCAGATTCAGGGTTTTTGTTGCAAGATGCAAAGAGTGTGGTGAAGACTGAAGCTGGGGAGATGAGAGTGATGAGAAGCTATGATAGTGGTTTTGGTGGTGGCAGAAGGAGTTTCGAGAGGCTCATGCACATTGCATTCATCACCATGGAACCAAGGTCCTTGTTCATTCCTCAGTACCTTGACTCTAATTTGGTCATCTTCATCCGAAGAGGGGAAGTAAAATTGGGATACATGAATGGAGATGAACTAGCAGAGAGAAGATTAAAGAGTGGGGATATATATGTAATTCCAGCAGGATCTCCATTCTATTTTCTCAACATTGGTCAAGGTCAGAGACTTCACATGGTTTGCAGTATTACCCCAGTTCAAGGAACACCCACACCTACCTTCCATTCCTTCTATATTGGTGGTGGTGCCAATCCAGAGTCTATTCTTTTTGGATTTGACCCTGAGATCCTTCAAACTGCATTCAATGCAACAAGAAGGGAACTAGATAGAGTTTTCAGTGCAGAATTAGAAGGACCAATAGTGTTTGTTGGTGATATTCGTGAGCCTAGTTTGTGGACCAAGTTCCTTCAAATGAAGGACCAAGACAAAGCCCAACACTTGAAGAAAATGGTGGTACAAGAACAAGAAGAACATGATGATCATGATCGTGATCATTATGATGAGAAAGAAGAAGATGAAAGGACAAGTTGGTCATGGAGAAAGCTATTGACCAGGATCTTGGGAAATGAGAGCAAGAAGAAAACAGATTACAAGGGCAGCACTGGTGGTTCTCCTGATTCATACAACCTCTATGACAAGAAACCAGATTTCAGAAACAGTTATGGTCATAGCAGTGCTCTTGATGGTGACGAATATCATCCACTCCGAGATGTTAACATCGGCGTTTTCCATGTCAACCTCACTGCGGGATCGATGATGGCTCCTCACGTGAATCCAAGAGCAACAGAATATGGAATCATACTTCGAGGTTCCGGCAGAATCCAAGTGGGGTTTCCAAATGGCACCAATGCTATGAACGCTGAGGTTCGAGTAGGTGACGTGTTCTTTGTCCCTAGATTCTTCCCTTTCTGCCAAATATCGTCAAGGACGGGTCCTTTGGAATTCGTGGGGTTTGCCGATTCTGCCAAAAAGAACTATCCGCAATTTCTGGCAGGATCGGTGTCCCTCGTGAGATCTATGATGGGTCCTGAGCTCGCCGCGGCTTTTGGTGTCCAAGAGGATACCATGCACCGTCTCGGCGATGCTCAGCGCGAGGCCATCATATTGCCTTCCACGTGGGTTCCCGTTGGTGGTGACAAGGAGAAAGGCAAAGAGCCACGTGGCGGAGACAGTCGGGAGAGAGAAAAAGAGCAACGTGGCAGAGATCCCGAGGAGAGTGAGAGAGAAGCTGGTGGTGACGAGGAAAAAGAAAAAGGCAAAGAGTCACGTGGCAGAGATCCTGAGGAGAGGGAGAGAGAAAGGAAGCCGCGTGATGGTGGTGCAGAGGAGAGGGAGAAGGTGCCACGTGGCCGAGGTGGTGATGTGGAAGGGAGGGAGAGTGTGCCACGTGGTAGGGATGTGAAGAGGGAGCCAAGGCCAAAAGCGGAGGAGGAAAGAGGTCCTACTGGGAAGGATTTGGCTAAGAATTTAGTTATGGGTATCATTGATGTTTGA 1809 0.4693 MGRNIGSLLLLALVIVVHHGVVVATPKSMELYKDQDEEYWDERRPSSSSSDSGFLLQDAKSVVKTEAGEMRVMRSYDSGFGGGRRSFERLMHIAFITMEPRSLFIPQYLDSNLVIFIRRGEVKLGYMNGDELAERRLKSGDIYVIPAGSPFYFLNIGQGQRLHMVCSITPVQGTPTPTFHSFYIGGGANPESILFGFDPEILQTAFNATRRELDRVFSAELEGPIVFVGDIREPSLWTKFLQMKDQDKAQHLKKMVVQEQEEHDDHDRDHYDEKEEDERTSWSWRKLLTRILGNESKKKTDYKGSTGGSPDSYNLYDKKPDFRNSYGHSSALDGDEYHPLRDVNIGVFHVNLTAGSMMAPHVNPRATEYGIILRGSGRIQVGFPNGTNAMNAEVRVGDVFFVPRFFPFCQISSRTGPLEFVGFADSAKKNYPQFLAGSVSLVRSMMGPELAAAFGVQEDTMHRLGDAQREAIILPSTWVPVGGDKEKGKEPRGGDSREREKEQRGRDPEESEREAGGDEEKEKGKESRGRDPEERERERKPRDGGAEEREKVPRGRGGDVEGRESVPRGRDVKREPRPKAEEERGPTGKDLAKNLVMGIIDV* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0376 602 Gene3D Jelly Rolls 305 477 IPR014710 -
Ahy13g0376 602 CDD cupin_7S_vicilin-like_C 320 471 - -
Ahy13g0376 602 CDD cupin_7S_vicilin-like_N 62 235 - -
Ahy13g0376 602 MobiDBLite consensus disorder prediction 483 589 - -
Ahy13g0376 602 Gene3D Jelly Rolls 48 240 IPR014710 -
Ahy13g0376 602 SUPERFAMILY RmlC-like cupins 61 470 IPR011051 -
Ahy13g0376 602 PANTHER OS03G0336100 PROTEIN 9 479 - -
Ahy13g0376 602 PANTHER OS03G0336100 PROTEIN-RELATED 9 479 - -
Ahy13g0376 602 MobiDBLite consensus disorder prediction 475 602 - -
Ahy13g0376 602 Pfam Cupin 313 460 IPR006045 -
Ahy13g0376 602 Pfam Cupin 91 174 IPR006045 -
Ahy13g0376 602 MobiDBLite consensus disorder prediction 257 276 - -
Ahy13g0376 602 SMART Cupin_1_3 52 214 IPR006045 -
Ahy13g0376 602 SMART Cupin_1_3 313 462 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0376 Ahy-Chr13 3765543 3768228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0376 61 474 Miscellaneous Gene Families AT2G18540 28.605 1.66e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0376 - - aip:107629183 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0376 13 3765543 3768228 Ahy13g0376 13 3765543 3768228 ECH
Ahy18g0463 18 4111000 4113604 Ahy13g0376 13 3765543 3768228 PCT
Ahy8g1272 8 28340082 28342065 Ahy13g0376 13 3765543 3768228 PCT
Ahy13g0376 13 3765543 3768228 Ahy18g0463 18 4111000 4113604 PCT
Ahy13g0376 13 3765543 3768228 Ahy8g1272 8 28340082 28342065 PCT