Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0727 ATGCGCTACACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTTTGGTGCTGTTGCTGCTGCTGATTTGTCTTGTTTTTCCGGCGATCGGATTCTTTTATGTCCGCCATAAATGGCGGATTTCAGTGGCTAGGAAGGAAGAGATCAGGAGGCTTCTGATTTTGGCTGCTGAGGAAACTGCCAGGGCCGAGAGAGAGGCCACGTATGGTTACGGTGCCGCGGCGGAAACCGCCGTCAAAAGCAATCAGTGTGCCGTGTGCTATGTTCCCGCCACCGCACGCTGCGCTCAGTGCAAATCGGTTCGCTACTGTTCGTTTGAGTGTCAAACTCTTCATTGGCGCCAAGGGCACAAATTGGAATGCCGTCTGCAAAGAATACTTCGGCAGAGTGATGTAGTTAGTGATCTTGGCAACAAGGTAAGCGAGCAAGAATTCTCTAGAATCGCTGACCAGAAGTCTGAAATTGCAGGTGCAGAGCATGAAGCGTCCGGTGAAAACCAACAAACTTCAGTCGCTGGTGTTTCTTCTAAAGTTTTATATGGAAAAAATGAAAATGTAAGAGATGAGTGCCTTGCAGGGGGAACTATAACAGATTCTAATTCTGAGTTGTCAAGTAACTCTTTTTCTGGCTTCTCAGCTTCTCCAAGTGCTAGTGAATCATCTGATGACTCCTCTATTTGTGAGAGTGTTATATCAAACGAGCATGACCAATCTGATGGACCAATTTTTGTTGATTCGACACTTGACATTCCAGATAGCACTTCAAGTGACGGTAGCATGGTTGTAGCTATGTCTTCATCACCCAAATTTGCCAGTTTGGTTGAATCAGTTGATGGTTTTTCGACAATGCGTAAATTAAATGAAAGTAGATCTGGTCCTTGTAAAGAAGAAGGAAAACTTGCAAAAAATGGTACTTCAGGTTCAGGTATGCTGAAGGGAGCAACAATCAAGCCTTCCATAGTGTCTTCTGGGTTCTGGGATAGAACTCTTGGCACAACTGGGATTGAAGAAGATGCCAACAGTGACACTTCTCCATCCCATTCGGATGAATCCACTCACAATACAGGATCTGATTCTCAGTCATTTCGCTTTTCGTTTAGTTCCATCGCTCTTATGCAAGCACAAGATAGTGAGGCAAAGGATTTTGTATCTGATAATCCTTCTCCCAATACTGTTGGGGACAATGTGCCTTGCTCAGGATCAGCATCAACGGAGAATGACAGAGATACAGTGAATTCTTCAAAGGCTACAAATCTTAAATTCATGAACAGCAAAGATTCCATACTTCCAAACCCTGCTGCTGCCCCTGTTTATGAATCTGATCAATTGGGATCTAAAGGCAGCTCTGTGCAACCCTTATCTTGTCTCTACCCACCATCCCCCAGTCTTAGCAAAGGTTCAGGTTGTGAAGATTCTTTGAATGTCCATAACTTGCAATCGTATATTTCTATGGCATCAAATCGTGTTGTAGGAAACCATGGCATCAATTCTAAATCTGCTGAAATTAGATGCCTGACACGTGACCTTGATTCTAATTTAGTCCGTAGAACTGATGCTCACTCAAATTCCAGTACAAAACATGTGAATAATGGTAATCAATCTGCCACTAGTACGTCGTCTGGGGGTGTTAGCTGTTCTGCAAATTCTAAGGGTGGCTTGAAATCATCTGTTTTAAAAGTTGTTGATCAGTTCCGAGGATCAAATTTCTCAAAGCAGTTTCCACTAGTTTGGAATGATACCGCAGGAAAACAAAGTGATAAGATGCTGCAGGGTCTTTTTCCTTACGAATTGTTTGTCAAGATTTATAACTCGAACAAGGGGGAGTTTAGCCCATTTGGTCTTATAAATTGTGGGAATAGCTGTTACGCCAATGCTGTACTCCAGTGCTTAGTATTTACACCACCCCTGACTGCATATTTTCTTCAAGGACTACATTCTAAAGCATGTGCAAATAAAAAATGTTTCAACTGTGAGTTTGAAAGTTTGATTTTGAAGTCAAAGGATACAAAATATCCACTCTCTCCTAAGGGCATACTCTCCCAACTAAGGAGAACTGGAAGTCAACTTGGTAATGGCAAAGAAGAAGATGCACATGAATTTCTAAGGCATGCCATTGACACAATGCAATCTGTTTGCCTTATGGATACTGGGGTTGATGTATGTGGTTCATTGGAAGAGGACACTACTTTAATTGGTCTAACATTTGGGGGTTACCTTAGATCAAAGATAAAATGCATGAAATGTGGAGGGAAATCTGAGCGTCAGGAAAGGATGATGGATCTTACTGTTGAGATAGAAGGGGACATAGCAACCCTACAGGAAGCTCTTCGACGATTTACAAGTACCGAGTCTTTGGATGGAGAAAATAAGTACCACTGTGTCAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAATTTCTGAGGCACCTAATGTTCTTACAATTGCATTAAAGAGATTCCAGGTACTTTATGTCTTAAATTCAAAGTATAATATGTTATTACCTTCATTTGTGCTGTCTATATGCAGAGAGTACATTAAATTTGTTACATTTGTCTTGCAGTCAGGAAAGTTTGGGAAGCTTAACAAGCCTATCCAGTTTCCTAAAACTCTTGACTTGGCTCCTTTCATGAGTGGGACTAGTGATAAATCACCTATATACAGACTGTATGGTGTAGTTGTTCACTTGGATATCATGAATGCTGCCTTTTCTGGTCACTATGTGAGCTATGTGAAGAATAGTCAAAACAAGTGGTTCAAGGTTGATGACAGTGTGGTGACACCTGTTGAGGTGGAGAGAGTCTTAACAAAAGGATCATATATGCTTTTTTATGCAAGATGTTCACCCAAGGCCCCAAGATCAATCAGAGGCAAGACACTGTCCCCAGAATCAAAAGGCAAAGTAACCGGAAAGACCGCAACGAAAACTCGGAATGTATCTATAACTTCTGGTCCTGCTGAATATATCAGTAGTCCAGATGATTCACCCACCTTGGACTCCTTCTATTCAAAGTTTCACCACCTGAAGAGAGTTTTAGAAGATGACTCGTCAAGTGACAATTCATCGCTAATCAGCAGTAATTCTGACTTAGGTTCTTGCAGCACCGATAGCACTCATGATTCGACCACCACAGATGAGTTCTCCAATTATATTTTCGGTGATTCAAGGGTTGGCTGGGGTAGCCCATGGAGGAACTCCGAATCCGACACCTCATCCTCCACCTCTTCCTCATCTTCTCCCCTGAACTTCAGGCATTCACCCCTAGCCGATATGGACCGATATGATTCAGTTTCTCCTGGTTTAAGTGCAGATATAGATGGCAATTTGTACAGGAACAAAATGGGGCATGCAGAAAGAAAAGGAGGTGTTGTGCCTCTCTCACATTCAGACACTCTACACCATAGGAAGTTAGAAAGTACTAGGATTAGCAGCAACAGTAATTTTAGGGATACTAACTCTCATCAGAGACTAGGATCTAACCATTTTAATGGCATAAGCTCTGGTGCACCTTGTAGAAAGCCAAGGGACAGAACGGATTGA 3543 0.4239 MRYTGDLGFSSLVLLVLLLLLICLVFPAIGFFYVRHKWRISVARKEEIRRLLILAAEETARAEREATYGYGAAAETAVKSNQCAVCYVPATARCAQCKSVRYCSFECQTLHWRQGHKLECRLQRILRQSDVVSDLGNKVSEQEFSRIADQKSEIAGAEHEASGENQQTSVAGVSSKVLYGKNENVRDECLAGGTITDSNSELSSNSFSGFSASPSASESSDDSSICESVISNEHDQSDGPIFVDSTLDIPDSTSSDGSMVVAMSSSPKFASLVESVDGFSTMRKLNESRSGPCKEEGKLAKNGTSGSGMLKGATIKPSIVSSGFWDRTLGTTGIEEDANSDTSPSHSDESTHNTGSDSQSFRFSFSSIALMQAQDSEAKDFVSDNPSPNTVGDNVPCSGSASTENDRDTVNSSKATNLKFMNSKDSILPNPAAAPVYESDQLGSKGSSVQPLSCLYPPSPSLSKGSGCEDSLNVHNLQSYISMASNRVVGNHGINSKSAEIRCLTRDLDSNLVRRTDAHSNSSTKHVNNGNQSATSTSSGGVSCSANSKGGLKSSVLKVVDQFRGSNFSKQFPLVWNDTAGKQSDKMLQGLFPYELFVKIYNSNKGEFSPFGLINCGNSCYANAVLQCLVFTPPLTAYFLQGLHSKACANKKCFNCEFESLILKSKDTKYPLSPKGILSQLRRTGSQLGNGKEEDAHEFLRHAIDTMQSVCLMDTGVDVCGSLEEDTTLIGLTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGDIATLQEALRRFTSTESLDGENKYHCVRCKSYEKAKKKLTISEAPNVLTIALKRFQVLYVLNSKYNMLLPSFVLSICREYIKFVTFVLQSGKFGKLNKPIQFPKTLDLAPFMSGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVSYVKNSQNKWFKVDDSVVTPVEVERVLTKGSYMLFYARCSPKAPRSIRGKTLSPESKGKVTGKTATKTRNVSITSGPAEYISSPDDSPTLDSFYSKFHHLKRVLEDDSSSDNSSLISSNSDLGSCSTDSTHDSTTTDEFSNYIFGDSRVGWGSPWRNSESDTSSSTSSSSSPLNFRHSPLADMDRYDSVSPGLSADIDGNLYRNKMGHAERKGGVVPLSHSDTLHHRKLESTRISSNSNFRDTNSHQRLGSNHFNGISSGAPCRKPRDRTD* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 966 995 - -
Ahy8g0727 1180 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 25 1160 - -
Ahy8g0727 1180 Coils Coil 45 65 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 1063 1085 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 200 239 - -
Ahy8g0727 1180 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25 1160 - -
Ahy8g0727 1180 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 612 627 IPR018200 GO:0004843|GO:0006511
Ahy8g0727 1180 Gene3D - 73 122 - -
Ahy8g0727 1180 Gene3D Cysteine proteinases 604 958 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 516 542 - -
Ahy8g0727 1180 Pfam Ubiquitin carboxyl-terminal hydrolase 611 945 IPR001394 GO:0004843|GO:0016579
Ahy8g0727 1180 SUPERFAMILY HIT/MYND zinc finger-like 78 123 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 1142 1167 - -
Ahy8g0727 1180 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 611 948 IPR028889 -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 333 358 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 1140 1180 - -
Ahy8g0727 1180 Coils Coil 147 167 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 200 259 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 376 411 - -
Ahy8g0727 1180 ProSitePatterns Zinc finger MYND-type signature. 83 120 IPR002893 -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 1016 1048 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 953 995 - -
Ahy8g0727 1180 Pfam MYND finger 83 120 IPR002893 -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 1018 1048 - -
Ahy8g0727 1180 MobiDBLite consensus disorder prediction 284 313 - -
Ahy8g0727 1180 SUPERFAMILY Cysteine proteinases 609 950 IPR038765 -
Ahy8g0727 1180 ProSiteProfiles Zinc finger MYND-type profile. 83 120 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0727 Ahy-Chr8 14272062 14278185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0727 582 966 Miscellaneous Gene Families AT4G31670 44.186 2.46e-107 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0727 K11855 - gmx:100793079 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1736 17 42408005 42415095 Ahy8g0727 8 14272062 14278185 hybridization