Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1736 ATGCGTGTTACCGTGGATCTAGGGTTTTCGCCGAGCCTGGTCCTCGTTCTGCTGGTTTGCTTCGTGTTTCCGGCGATCGGGTTGGTGGTCCGCCACAAATGGAGGCTTGCGGTGGCAAGGTCGGAGGAGGTCAGGAGGCTGCTCGTCCTCGCGGCGGAGGAGGCCGCCAGGGCCGAGAGCGAGGCCACTTACCAGTATTTTGACGGGGCCGACGTTTCGGCCCCCACTTCTGCCGCTCCGGCGAAGAGCAATCAGTGTGCCGTGTGCTTCTGCCCCACCACGACGCGCTGTTCACGTTGCAAAGCGGTTCACTATTGTTCTGGTAAGTGTCAAATCGTTCACTGGCGTCAAGGTCACAAAGATGAATGCCGTCCTCCCAGTAATATTTGCCAGATTAATGACCGGGTAAGTGATCTTGGCAAAAAGGTTGCAGCACCACATGAAGTCCATGATGAGAAGTCTAAGATCGAGAGCATAGGGCATAAAACATCCCCTGAGGAACCTCTGTCATCCGAGGCTAGTTTATCTCCTGAAAGCTCATTTAGAAAGGATGATAACAGAAGAGTTGAGTCTTTAGGTGAGGGAAATATTACGGACTCTGCATTTTCTGGATTCTCGGCTTCCAATACTAACAGTGAATCATCTGATGATTCCTCTGTATGTGAGAGCATATCAAATGAACATGAGAGAACGGAGGGACACATCTTTGTTGAACCCACCCTTGAAAATTCTGATTCCGTTGAAACTGAGAACAAGATAGGTGTTGCCGTTTCATTGTCGCCTAAATTTGCTAGTTTGGTTGATGAAGCAGGTGGTTTTTCTTCAATGTCAAAATTAAATAGAGTTAGACCTGGTTTTAATAAAGAAGAAAATAAACACACAACAACTGGTAGCTTGGGTTTGAATATGGGGAAGGGGCCAACAATTGAGTCTCCCACAGTGTCATCCGGTTTTTGGGATAAAACTCTTGATTCGAGGGTTATCAAAGATGATGATAACAGTGGCGCCCAACCTCGCCACTTTGATGATGCTCCTCCAAAGTCTTCTGGAAAGGAAACGTCATGTGCTGGATTGGCATCTTCAGAGAATGAAGGTTTTTCACGGGATTCAAGCATCCAAAAGTTGCAATCTGTTGGCTCCAAGGTGTCAAATCATGATGTGAACAACCCTGATAGCACCTTGCAGTCAGCTGAAATTAAATATCTGCCACATGCATTGGATGGTACTACATTGGTCTCTAAAGCCAAAGAGCATTCACAGTATGATATGAAATCTCGAAGTAATGGCATTCAATCTGGTACTGCAACTTCAACTCAGAATGTTAGCGATTCTCTGCATTCTGAGAATGGGACAAAAATCTCTAGTCTAAAAGTTGTTGATCAGTTTAAAGGAGCAAATTTGACACAAAACTTATCAATGGCTGTTGGGAGTGATATTGCTAGAAGATATAGTGACCAGGTTCTATTTCCATATGATTTATTTGTTAAGCTTTATAACTGGAACAGAGTGGAGTTACAACCATTTGGTCTTATAAATTGTGGAAACAGTTGTTATGCTAATGCTGTACTCCAGTGCTTAGCATTTACGCCACCGCTAACTGCTTACTTGCTTCAAGGACTTCATTCTAAATCATGTGCAAATAAAAAACTGTGTTTTGCCTGTGAACTTGAAAGTTTGATTCTGAAATCCAAGGAAACAAAATCTGCACTATCACCTGTGGGCATACTGTCTAAACTACAAAGTATTGGAAGTCAACTTGGTAATGGAAAGGAAGAAGATGCACATGAATTCCTAAGGCATGCTATTGAGGCAATGCAATCTGTTTTCCTTATGGAATCAGAGTTTAATGCATTAGACTCATTAAAAGAGGAGACAAATTTAATGGGCCTAACGTTCGGAGGCTACCTTCGATCCAAGATACAATGCATGGAATGTGGAGGGAAATCTGAGCGTCATGAAAGGATGATGGATCTGACTGTTGAGATAGACGGGGATATAGCATCCTTGGAGGAGGCTCTTCGCCGTTTTACAAGCACTGAAACTCTAGATGGAGAGAACAAGTACAACTGTGTCAGATGTAAATCTTATGAGAGGGCCAAGAAGAAATTGACAGTTTCAGAAGCACCTAATGTTCTTACAATTGTATTAAAGAGATTTCAGTCTGGAAAATTTGGGAAGCTCAATAAGCCCATTCAGTTTCCTGAAATACTCAACTTTGCACCTTTCATGAGTGGGACTAGTGATAGATCACCTATATACAGGCTGTATGGGGTAGTTGTTCATTTGGATATCATGAATGCTGCCTTTTCTGGTCACTACGTGTGCTATGTGAAGAATTTCCAAAATAAGTGGTTCAAGGTTGACGATAGTGTGGTGACAGCTGTTGAATTGGACAAAGTTTTGAAGGAGGGGGCGTACATGCTTTTTTATGCAAGGTGCTCACCGAGGGCCCCAAAATTAATCAGAAGCAGGATAGTATCCGATTCAAAAATCAAAGTCCATGGAAAAGCTTTTATAATGAAATCAAGACATGTACCTTCAGATTCTGGTGCCTCTGAACGCATGACTAGTAGGGATGGTGCTGCCACCTTAGACACCCTCTATTCAAAGTTTTACCACATAAGAAGGGTTTTGGAAGACGACATGAGTGATAATTCATCTCTTTTCAGCAGCAATTCAGATGAAGGTTCTTGCAGCACCGATAGCACCCATGATTCAACCAGTAATGAGGACTTTGCTGAGTATATTTTCCGTGATTCGGGGCGTGGTAACTTGTTGAGGAATCCTGATTCTGACCCTTACTCTTCAACATCATCTTCTCCCTCGAACTCTGGACATTTGCCACTTTCAGACATGGGCCCGCACGACTCAGTTTTACCAGATACAGCTGTGCTGCGGCCACCTCCCGCCAGTCCAAGAATACAGAAAGATGGTCTTTTGTACAGGGGCCGACCTCTGGATCTTGAAAGGAGAGAAGGTGCTTTTCTTTTCAATCCTGAGTATACATCTGTAGAGCATAGGAAATTAGATACAAGTAGGAGCAGCAGTAGTTTTAGGAAAACTGACACTAAGAATGTAGGATCTAACCAGTATAATTATGTGAACTTTGGTGTATCTTGTACAAAATCAAGGGAAAGAACAGACTGA 3147 0.4328 MRVTVDLGFSPSLVLVLLVCFVFPAIGLVVRHKWRLAVARSEEVRRLLVLAAEEAARAESEATYQYFDGADVSAPTSAAPAKSNQCAVCFCPTTTRCSRCKAVHYCSGKCQIVHWRQGHKDECRPPSNICQINDRVSDLGKKVAAPHEVHDEKSKIESIGHKTSPEEPLSSEASLSPESSFRKDDNRRVESLGEGNITDSAFSGFSASNTNSESSDDSSVCESISNEHERTEGHIFVEPTLENSDSVETENKIGVAVSLSPKFASLVDEAGGFSSMSKLNRVRPGFNKEENKHTTTGSLGLNMGKGPTIESPTVSSGFWDKTLDSRVIKDDDNSGAQPRHFDDAPPKSSGKETSCAGLASSENEGFSRDSSIQKLQSVGSKVSNHDVNNPDSTLQSAEIKYLPHALDGTTLVSKAKEHSQYDMKSRSNGIQSGTATSTQNVSDSLHSENGTKISSLKVVDQFKGANLTQNLSMAVGSDIARRYSDQVLFPYDLFVKLYNWNRVELQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKKLCFACELESLILKSKETKSALSPVGILSKLQSIGSQLGNGKEEDAHEFLRHAIEAMQSVFLMESEFNALDSLKEETNLMGLTFGGYLRSKIQCMECGGKSERHERMMDLTVEIDGDIASLEEALRRFTSTETLDGENKYNCVRCKSYERAKKKLTVSEAPNVLTIVLKRFQSGKFGKLNKPIQFPEILNFAPFMSGTSDRSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNFQNKWFKVDDSVVTAVELDKVLKEGAYMLFYARCSPRAPKLIRSRIVSDSKIKVHGKAFIMKSRHVPSDSGASERMTSRDGAATLDTLYSKFYHIRRVLEDDMSDNSSLFSSNSDEGSCSTDSTHDSTSNEDFAEYIFRDSGRGNLLRNPDSDPYSSTSSSPSNSGHLPLSDMGPHDSVLPDTAVLRPPPASPRIQKDGLLYRGRPLDLERREGAFLFNPEYTSVEHRKLDTSRSSSSFRKTDTKNVGSNQYNYVNFGVSCTKSRERTD* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1736 1048 ProSiteProfiles Zinc finger MYND-type profile. 86 123 IPR002893 -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 196 221 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 929 947 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 417 448 - -
Ahy17g1736 1048 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 508 813 IPR028889 -
Ahy17g1736 1048 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 509 524 IPR018200 GO:0004843|GO:0006511
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 884 906 - -
Ahy17g1736 1048 Pfam Ubiquitin carboxyl-terminal hydrolase 508 810 IPR001394 GO:0004843|GO:0016579
Ahy17g1736 1048 SUPERFAMILY Cysteine proteinases 504 816 IPR038765 -
Ahy17g1736 1048 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 20 1031 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 424 448 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 178 192 - -
Ahy17g1736 1048 Gene3D Cysteine proteinases 501 822 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 144 231 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 144 162 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 353 391 - -
Ahy17g1736 1048 Pfam MYND finger 86 123 IPR002893 -
Ahy17g1736 1048 Coils Coil 41 61 - -
Ahy17g1736 1048 ProSitePatterns Zinc finger MYND-type signature. 86 123 IPR002893 -
Ahy17g1736 1048 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20 1031 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 323 338 - -
Ahy17g1736 1048 Gene3D - 73 127 - -
Ahy17g1736 1048 SUPERFAMILY HIT/MYND zinc finger-like 82 127 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 291 320 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 284 391 - -
Ahy17g1736 1048 MobiDBLite consensus disorder prediction 884 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1736 Ahy-Chr17 42408005 42415095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1736 486 830 Miscellaneous Gene Families AT4G31670 48.424 1.95e-117 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1736 K11855 - gmx:100782303 1176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1736 17 42408005 42415095 Ahy17g1736 17 42408005 42415095 ECH
Ahy17g1736 17 42408005 42415095 Ahy8g0727 8 14272062 14278185 hybridization