Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0713 ATGGACTCTGTTCCTTTCCACGATGGCAACATCCACCATATTCTCGAAACCCGATACCTTCACTCTCGCCAAGATGTTAATCATAGCTTGCAGACACACTCCTCGTTGATTCGCAGGCTTACTCAGGAGAGAGAGTTAGAGGGCCACCTTGGCTGTGTCAATGCTGTGGCTTGGAATTCCAGAGGCTCATTATTGATATCTGGATCAGATGATACACGGGTCCGATTATTTAATTTGTCTCACTTAAATGGATCTGCTGAAAATGCCATTGCTCCATCAGCACTTTACCAATGCCACACAAGGAGAGTCAAGAAGTTGGCTGTTGAAAATGGAAACCCTAACGTGGTATGGAGTGCTAGTGAAGATGGGACCTTGAGGCAGCATGATTTTCGAGAGGGAACATCTTGTCCGCCAGCAGGATCTTCGCACCAAGAGTGTAGAAGTGTTCTACTCGACTTACGGAGTGGAGCCAAAAGGTCACTTGCTGATCCTCCTAAACAAGTTCTAGCCCTAAAATCTTGTGATATCAGCTCAACTAGACCACATCTGCTCCTTGTTGGCGGGAGTGATGCTTTTGCTCGCTTGTATGATCGGAGGATGCTACCACCTTTGAGCTCCTGTCGGAAAAGAATGTCACCACCACCTTGTGTCAATTATTTCTGTCCAATGCATCTTTCCGATCGTGGACATCCAAGCTTGCACTTAACTCATGTTACATTTGGTCCTGATGGAGATGAGGTTCTCCTTAGCTATAGTGGAGAGCATGTTTACTTGATGAATGTTAATCATGCTGGATTGAATGACATGCAATATACTTCAGGAGATGTATCAAAACTAATGACATATTCTCCAACAATTAATGGAATGGAATTGCAACCTTCTGTATCTAGTGTTTTCCCAAATGGATTTTCAATAAAAAAGAATGTTGCTGCAAAGATTGACTACTGCAGGAAACTAATAAAATACGCTGAAAAGACCTTGAATGATGGTCCTTATTATGGAATTGAGGCATGTAATGAAGTTTTGAATTGCTACAGCCTTACTATTGGGCCTGCACTAAAATATGAATGCCTGTGTATTCGAGCTGCACTATTGCTTAAGAGGAAGTGGAAAAATGATGCTCACATGGCCATAAGGGACTGCTGTGCTGCTAGGAAAATTGATAACTACGACTACAAAGCACTTTACTATATGTCAGATGCATTGTCACAGTTAGGAAGGCACAAAGAAGCATTGGATTTTGCTGTTGCTGCTCAGCTGTTGGCCCCATCCATACCTGAAGTTGCAGAAAGAGTAGAGAAAGCTAAGAAGGACATTTCTTCAGCCGAGGCAGAGAAAAATAACAAGACAAATGATGGAGGATCAAGATTCGATAGTCGAGGTGGGAGAATTTTGTCATTAAGTGACATACTCTATCGTTCGGAGGCTAACAGTGATGCTTCCCAAGATGGTCCAAGATCAGAGAGGGATGACTCTGATTATGATGAGGAGTTGGAGTTGGACTTTGAAACATCAATGTCTGGTGATGAGGGACATGATGTTGAGTCCAATATTCTTCATGGGAGTTTAAACCTTAGAATTCACCGAAGGGGTGACTCCAGAGAAAGCACTGGTGCGAATGGCACTGTTGAATCACCTTCGTCCTCATCACAGAATGACAAAGCTTATCAGTCTGAAGCAGCTATTGACATGAATCAAAGATTTATTGGCCATTGCAATGTTGGAACTGATATAAAACAGGCCAGTTTTCTTGGTCAAAGAGGTGAGTTTGTTGCTAGTGGAAGTGATGATGGCAGATGGTTTATCTGGGAAAAGGGAACTGGTAGACTCATAAAAATGCTGAACGGTGATGAATCTGTTGTAAATTGTGTACAATGCCATCCATTTGATTTTGTTGTGGCAACAAGTGGAATTGATAGCACAATAAAGTTATGGACTCCAAGTGCCCCTGTTCCATCTGCCGTAGCTGGTGGTGCAGCGGGACCAGAGACTGCTGATGTATTGGTTGCTATGGAGAGCAATCAACAAAAGTTATCCCGTGGTCGTGATTCCATTCTGCCCTTTGAGCTTTTGGAGCCATTTAGAATGCATGAGTTTCCCGAAGGATCCCTGCGCCTGCGTCCTTTTGAATGTGCCCAGAGCTAA 2145 0.4331 MDSVPFHDGNIHHILETRYLHSRQDVNHSLQTHSSLIRRLTQERELEGHLGCVNAVAWNSRGSLLISGSDDTRVRLFNLSHLNGSAENAIAPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSSHQECRSVLLDLRSGAKRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFGPDGDEVLLSYSGEHVYLMNVNHAGLNDMQYTSGDVSKLMTYSPTINGMELQPSVSSVFPNGFSIKKNVAAKIDYCRKLIKYAEKTLNDGPYYGIEACNEVLNCYSLTIGPALKYECLCIRAALLLKRKWKNDAHMAIRDCCAARKIDNYDYKALYYMSDALSQLGRHKEALDFAVAAQLLAPSIPEVAERVEKAKKDISSAEAEKNNKTNDGGSRFDSRGGRILSLSDILYRSEANSDASQDGPRSERDDSDYDEELELDFETSMSGDEGHDVESNILHGSLNLRIHRRGDSRESTGANGTVESPSSSSQNDKAYQSEAAIDMNQRFIGHCNVGTDIKQASFLGQRGEFVASGSDDGRWFIWEKGTGRLIKMLNGDESVVNCVQCHPFDFVVATSGIDSTIKLWTPSAPVPSAVAGGAAGPETADVLVAMESNQQKLSRGRDSILPFELLEPFRMHEFPEGSLRLRPFECAQS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0713 714 MobiDBLite consensus disorder prediction 475 494 - -
Ahy8g0713 714 SMART WD40_4 561 604 IPR001680 GO:0005515
Ahy8g0713 714 SMART WD40_4 39 78 IPR001680 GO:0005515
Ahy8g0713 714 SMART WD40_4 164 197 IPR001680 GO:0005515
Ahy8g0713 714 SMART WD40_4 607 646 IPR001680 GO:0005515
Ahy8g0713 714 SMART WD40_4 89 129 IPR001680 GO:0005515
Ahy8g0713 714 MobiDBLite consensus disorder prediction 436 453 - -
Ahy8g0713 714 MobiDBLite consensus disorder prediction 524 556 - -
Ahy8g0713 714 MobiDBLite consensus disorder prediction 536 556 - -
Ahy8g0713 714 Gene3D - 558 679 IPR015943 GO:0005515
Ahy8g0713 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 80 IPR001680 GO:0005515
Ahy8g0713 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 46 80 - -
Ahy8g0713 714 Coils Coil 425 452 - -
Ahy8g0713 714 MobiDBLite consensus disorder prediction 436 461 - -
Ahy8g0713 714 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 8 74 IPR045151 -
Ahy8g0713 714 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 71 713 - -
Ahy8g0713 714 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 8 74 - -
Ahy8g0713 714 SUPERFAMILY WD40 repeat-like 41 645 IPR036322 GO:0005515
Ahy8g0713 714 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 71 713 IPR045151 -
Ahy8g0713 714 Pfam WD domain, G-beta repeat 44 78 IPR001680 GO:0005515
Ahy8g0713 714 Gene3D - 8 285 IPR015943 GO:0005515
Ahy8g0713 714 SUPERFAMILY TPR-like 354 430 IPR011990 GO:0005515
Ahy8g0713 714 Gene3D Tetratricopeptide repeat domain 304 456 IPR011990 GO:0005515
Ahy8g0713 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 614 645 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0713 Ahy-Chr8 13960868 13970877 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0713 K11807 - gmx:100793917 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3012 17 130702102 130712183 Ahy8g0713 8 13960868 13970877 hybridization