Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0651 ATGAGAAATGGTGGTGACCGTGCTGCCTTTAGATGCGATAACAGCGTCATTATTCAAGGAAGAGAAATGGTAAAACCCTGCGTGGAAAGCACTGGTTACGGTGGTTCTGTAAGAGGTTTCAAGAAGGGTCACGGTCAAGGACAGGTTCCATGCGATGAGCTTCATCATCATTATCATAATAATAATGGCCAAGGTGGTGGTGGTGGTGGTGGAAACAACAACAATAACACCAACAACAACAATGGCGGTTTCGTGAGGGATCCATCGTCGGTGCCATTGATGCTGGATTTCTATAACCTAGCTGAGGCGCAGGGTTACGTGTACAACATGGCGAAGGACCAGAACGGTTGCAGGTTTTTGCAGAGGATGGTTGAAGAAGGCACCTTTGAGGATGTAAGGGTGGTTTTTGAAGGGATCGTTGAGAATGTTGTGGAGCTCATGATGGACCCTTTTGGTAACTACCTTGTTCAGAAGCTTCTAGATGTTTGCAATGAAGATCAAAGGTTGCAAATTGTTCTCATGCTCACTAAAGAACAAGGCCAGCTTGTCCGAATCTCCTTGAATACCCACGGCACGCGCGTGGTGCAGAAGCTGATTGAGACCCTCAACTCAGCGAAGCAAATTTCATTGGTGAAGGGTGCAATTCAACCAGGTTTCCTTGACCTTATTAAGGATCTCAATGGAAACCATGTCATACAACGTTGCTTGCAATGTCTTAGCTGTCAAGATAATGAGTTTATTTTTGAAGCTGGTGTAAAGTTTTGTGTTGACATAGCTACTCATCGACATGGATGCTGTGTACTACAACGTTGCATTGATTATTCCGTTGGAAAACATCGTGAGAGGCTGGTCGCAGAAATTTGCAAGCATGGTCTTCTCCTCGCTCAGGATCCATTTGGAAACTATGTTGTTCAGTATATTATAGAGATAGAGAACCCAACTGCCTCAACGAAATTGATGTCTCAGCTGAAAGGGAATTTTGTGAACCTGTCTACACAAAAATTCAGCAGCCATGTGGTTGAGAAATGCCTCAAGCATGTTGCAGATAGCAGGTCCAGAATTGTCCGTGAATTGCTCTCTACACCCCACTTTGAGCAGTTATTGCAAGACCCTTATGCCAACTACGTCATTCAATCTGCTCTTGCATATACCAAGGGTGCACTTCATGTATCATTGGTGGAAGCAGTTAGGCCATACAAGATCTTGCGCACTAGTCCATACTGCAAGAGGATATTCTCTGGAAGTCTACTTAAGAAGTGA 1260 0.4444 MRNGGDRAAFRCDNSVIIQGREMVKPCVESTGYGGSVRGFKKGHGQGQVPCDELHHHYHNNNGQGGGGGGGNNNNNTNNNNGGFVRDPSSVPLMLDFYNLAEAQGYVYNMAKDQNGCRFLQRMVEEGTFEDVRVVFEGIVENVVELMMDPFGNYLVQKLLDVCNEDQRLQIVLMLTKEQGQLVRISLNTHGTRVVQKLIETLNSAKQISLVKGAIQPGFLDLIKDLNGNHVIQRCLQCLSCQDNEFIFEAGVKFCVDIATHRHGCCVLQRCIDYSVGKHRERLVAEICKHGLLLAQDPFGNYVVQYIIEIENPTASTKLMSQLKGNFVNLSTQKFSSHVVEKCLKHVADSRSRIVRELLSTPHFEQLLQDPYANYVIQSALAYTKGALHVSLVEAVRPYKILRTSPYCKRIFSGSLLKK* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0651 419 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 80 419 IPR033133 GO:0003723
Ahy8g0651 419 ProSiteProfiles Pumilio RNA-binding repeat profile. 214 249 IPR001313 GO:0003723
Ahy8g0651 419 CDD Pumilio 105 413 IPR033712 GO:0003723
Ahy8g0651 419 SUPERFAMILY ARM repeat 100 412 IPR016024 -
Ahy8g0651 419 SMART pum_5 177 212 IPR001313 GO:0003723
Ahy8g0651 419 SMART pum_5 250 285 IPR001313 GO:0003723
Ahy8g0651 419 SMART pum_5 359 394 IPR001313 GO:0003723
Ahy8g0651 419 SMART pum_5 102 137 IPR001313 GO:0003723
Ahy8g0651 419 SMART pum_5 138 173 IPR001313 GO:0003723
Ahy8g0651 419 SMART pum_5 322 356 IPR001313 GO:0003723
Ahy8g0651 419 SMART pum_5 286 321 IPR001313 GO:0003723
Ahy8g0651 419 SMART pum_5 214 249 IPR001313 GO:0003723
Ahy8g0651 419 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 78 419 - -
Ahy8g0651 419 MobiDBLite consensus disorder prediction 44 85 - -
Ahy8g0651 419 ProSiteProfiles Pumilio RNA-binding repeat profile. 250 285 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 142 172 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 181 208 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 326 359 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 107 139 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 363 385 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 293 321 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 219 249 IPR001313 GO:0003723
Ahy8g0651 419 Pfam Pumilio-family RNA binding repeat 255 288 IPR001313 GO:0003723
Ahy8g0651 419 ProSiteProfiles Pumilio RNA-binding repeat profile. 322 360 IPR001313 GO:0003723
Ahy8g0651 419 ProSiteProfiles Pumilio RNA-binding repeat profile. 177 212 IPR001313 GO:0003723
Ahy8g0651 419 ProSiteProfiles Pumilio RNA-binding repeat profile. 102 137 IPR001313 GO:0003723
Ahy8g0651 419 MobiDBLite consensus disorder prediction 65 85 - -
Ahy8g0651 419 PANTHER PUMILIO HOMOLOG 7, CHLOROPLASTIC-RELATED 78 419 - -
Ahy8g0651 419 ProSiteProfiles Pumilio RNA-binding repeat profile. 286 321 IPR001313 GO:0003723
Ahy8g0651 419 Gene3D - 95 416 IPR011989 -
Ahy8g0651 419 ProSiteProfiles Pumilio RNA-binding repeat profile. 138 174 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0651 Ahy-Chr8 12858065 12861771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0651 - - aip:107608433 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2948 17 129477003 129482160 Ahy8g0651 8 12858065 12861771 hybridization
Ahy17g2948 17 129477003 129482160 Ahy8g0651 8 12858065 12861771 PCT
Ahy8g0651 8 12858065 12861771 Ahy17g2948 17 129477003 129482160 PCT