Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0623 ATGGGTTCGGTTTTCAGTGCTGCAAATGCTATACCTAAGCTGAATGAAGTCTCTTCGAACGAGACGTGCAAGAGGCAGAAGATGTCATTATCTACATTTGATGAAGAGAGTCCAAGATTGATTCCTAATCTTCCTGATGAGTTATCACTTCAGATTCTTGCTAGGCTTCCGAGAATATCTTACTTCAATGTAAGATTGGTGTCAAGGAAGTGGAAAGCAACTATCATGAGTCCAGAAATATATGAAGTAAGAAAAGAACTCCGGACCTCTGAAGAGTGGCTATATCTGTTGATCAAGGTTGGGGAATATAAACAGCAATGGTATGCTGTTGATCCTCACTCTCAGATATGGCAGAGACTACCTACTATGCCTAAAGTTGCTGAAGAGCAAGAATCAAGAAAGAGTTCTTCCAAGCTTTGGATGTGGAACATGGTAGAAGGTAACAGAATAGCCAAAGTTATCAGAGGCTTTCTTGGACATAAGGATGCATTCGATGAAATGCCCTTTTTTGGTTGTGCTATAGGAGCTGTTGATGGATGTCTCTATGTTCTAGGAGGATTCTCTAAAGCTTCAACTACAAGCAGCGTCTGGCGATTTGATCCAATGCAAAACACATGGAGCAAGGTGACTCCTATGTCCACAGGTAGAGCATACTGCAAGACCGGAATCTTAAACAATAAGCTTTATGTTGTTGGAGGGGTTAGCCAAGGCCAAGCCGGACTAATTCCTCTTCAATCTGCCGAAGTTTTCGACCCTTCGACTGATACATGGTCAGATGTCCCTAGCATGCCATTCTCCAAAGCTCAAGTCATGCCAACAGTATTTTGGGCCGACATGTTAAAGCCTATTGCCACGGGATTAACCTCATACATGGGAAGATTGTGTGTTCCACAAAGCCTATATTCATGGCCATTTTTCGTTGACGTCGGCGGAGAAATCTATGATCCCGAGACAAACTCATGGATTGAAATGCCAACTGGGATGGGTGAGGGTTGGCCTGCAAGACAAGCAGGTTCAAAATTGAGTGTAGTAGTGGATGGTGAGTTATATGCATTTGATCCTTCAAATTCCCCAGATAGTGGAAGGATCAAGGTGTATGACCAAGGAGAAGATGCTTGGAAAGTTGTGATTGGAAAAGTTCCAATACATGATTCAGCAAATTCAGAGTCACCATATTTGCTTGCTGGCTTCCATGGGAAACTTCATGTGATTACAAAAGATGCAAATCATGATGTTGCTGTTTTGAGGGCTGATCTGAGAAACAACCGGGATTGTTCTTCTCCCTCAATATCTTCAACTTCTTCATCATCATCATCATCATCATCACACAGTGCTGCTGAATCAGATGCAGTTGTTTGGAAGGTAGTTGCAAGCAGGGATTTTGGGAAGGCTGAACTTGTCAGTTGCCAAGTTATTGACATATAA 1425 0.4253 MGSVFSAANAIPKLNEVSSNETCKRQKMSLSTFDEESPRLIPNLPDELSLQILARLPRISYFNVRLVSRKWKATIMSPEIYEVRKELRTSEEWLYLLIKVGEYKQQWYAVDPHSQIWQRLPTMPKVAEEQESRKSSSKLWMWNMVEGNRIAKVIRGFLGHKDAFDEMPFFGCAIGAVDGCLYVLGGFSKASTTSSVWRFDPMQNTWSKVTPMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDTWSDVPSMPFSKAQVMPTVFWADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPTGMGEGWPARQAGSKLSVVVDGELYAFDPSNSPDSGRIKVYDQGEDAWKVVIGKVPIHDSANSESPYLLAGFHGKLHVITKDANHDVAVLRADLRNNRDCSSPSISSTSSSSSSSSSHSAAESDAVVWKVVASRDFGKAELVSCQVIDI* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0623 474 SMART fbox_2 44 84 IPR001810 GO:0005515
Ahy8g0623 474 SMART kelc_smart 227 277 IPR006652 GO:0005515
Ahy8g0623 474 SMART kelc_smart 180 226 IPR006652 GO:0005515
Ahy8g0623 474 SUPERFAMILY F-box domain 37 122 IPR036047 GO:0005515
Ahy8g0623 474 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
Ahy8g0623 474 SUPERFAMILY Kelch motif 101 404 IPR015915 GO:0005515
Ahy8g0623 474 Pfam Kelch motif 170 213 IPR006652 GO:0005515
Ahy8g0623 474 Pfam Kelch motif 216 264 IPR006652 GO:0005515
Ahy8g0623 474 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 9 474 - -
Ahy8g0623 474 Gene3D - 84 388 IPR015915 GO:0005515
Ahy8g0623 474 MobiDBLite consensus disorder prediction 424 443 - -
Ahy8g0623 474 Gene3D - 26 80 - -
Ahy8g0623 474 Pfam F-box domain 42 79 IPR001810 GO:0005515
Ahy8g0623 474 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 9 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0623 Ahy-Chr8 12157901 12161032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0623 41 260 EF-hand Containing Proteins AT4G39560 26.244 6.77e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0623 - - gmx:100806691 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2913 17 128811319 128814550 Ahy8g0623 8 12157901 12161032 hybridization