Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2913 ATGGGTTCGGTTTTCAGTGCTGCAAATGCTATACCTGAGCTGAATGAAGTCTCTTTGAACGAGACGTGCAAGAGGCAGAAGATGTCATCATCTACATTCGATGAAGAGAGTCCAAGATTGATTCCTAATCTTCCTGATGAGTTATCACTTCAGATTCTTGCTAGGCTTCCGAGAATATCTTACTTCAATGTAAGATTGGTGTCAAGGAAGTGGAAAGCAACTATCATGAGTCCAGAACTATATGAAGTAAGAAAAGAACTCGGGACCTCTGAAGAGTGGCTATATCTGTTGATCAAGGTTGGGGAATATAAACAGCAATGGTATGCTGTTGATCCTCACTCTCAGATATGGCAGAGACTACCTACTATGCCTAAAGTTGCTGAAGAGCAAGAATCAAGAAAGAGTTCTTCCAAGCTTTGGATGTGGAACATGGTAGAAGGTAACAGAATAGCGAAAGTTATCAGAGGCTTTCTTGGACATAAGGATGCATTCGATGAAATGCCCTTTTTTGGTTGTGCTATAGGAGCTGTTGATGGATGTCTCTATGTTCTAGGAGGATTCTCTAAAGCTTCAACCACAAGCAGCGTCTGGCGATTTGATCCAATGCAAAACACATGGAGCAAGGTGACTCCTATGTCCACAGGTAGAGCATACTGCAAGACCGGAATCTTAAACAATAAGCTTTATGTTGTTGGAGGGGTTAGCCAAGGCCAAGCTGGACTAATTCCTCTTCAATCTGCCGAAGTTTTCGACCCTTCGACTGATACATGGTCAGATGTCCCTAGCATGCCATTCTCCAAAGCTCAAGTCATGCCGACAGTTTTTTGGGCTGACATGTTAAAGCCTATTGCCACGGGATTAACCTCATATATGGGAAGATTGTGTGTTCCACAAAGCCTATATTCATGGCCATTTTTCGTTGACGTCGGCGGAGAAATCTATGATCCCGAGACAAACTCATGGATTGAAATGCCAACCGGGATGGGTGAGGGTTGGCCTGCAAGACAAGCAGGTTCAAAATTGAGTGTAGTAGTGGATGGTGAGTTATATGCATTTGATCCTTCAAATTCCGCAGATAGTGGAAGGATCAAGGTGTATGATCAAGGAGAAGATGCTTGGAAAGTTGTGATTGGAAAAGTTCCAATACATGATTCAGCAAATTCAGAGTCACCATATTTGCTTGCTGGCTTCCATGGGAAACTTCATGTGATTACAAAAGATGCAAATCATGATGTTGCTGTTTTGAGGGCTGATCTGAGAAACAACCGGGATTGTTCTTCTCCCTCAATATCTTCAACTTCATCATCATCATCATCATCATCACACAGTGCTGCTGAATCAGATGCAGTTGTTTGGAAGGTAGTTGCAAGCAGGGATTTTGGGAAGGCTGAACTTGTCAGTTGCCAAGTTATTGACATATAA 1422 0.4269 MGSVFSAANAIPELNEVSLNETCKRQKMSSSTFDEESPRLIPNLPDELSLQILARLPRISYFNVRLVSRKWKATIMSPELYEVRKELGTSEEWLYLLIKVGEYKQQWYAVDPHSQIWQRLPTMPKVAEEQESRKSSSKLWMWNMVEGNRIAKVIRGFLGHKDAFDEMPFFGCAIGAVDGCLYVLGGFSKASTTSSVWRFDPMQNTWSKVTPMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDTWSDVPSMPFSKAQVMPTVFWADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPTGMGEGWPARQAGSKLSVVVDGELYAFDPSNSADSGRIKVYDQGEDAWKVVIGKVPIHDSANSESPYLLAGFHGKLHVITKDANHDVAVLRADLRNNRDCSSPSISSTSSSSSSSSHSAAESDAVVWKVVASRDFGKAELVSCQVIDI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2913 473 Gene3D - 23 80 - -
Ahy17g2913 473 SUPERFAMILY Kelch motif 101 404 IPR015915 GO:0005515
Ahy17g2913 473 SMART kelc_smart 227 277 IPR006652 GO:0005515
Ahy17g2913 473 SMART kelc_smart 180 226 IPR006652 GO:0005515
Ahy17g2913 473 Pfam Kelch motif 216 264 IPR006652 GO:0005515
Ahy17g2913 473 Pfam Kelch motif 170 213 IPR006652 GO:0005515
Ahy17g2913 473 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
Ahy17g2913 473 SUPERFAMILY F-box domain 37 122 IPR036047 GO:0005515
Ahy17g2913 473 SMART fbox_2 44 84 IPR001810 GO:0005515
Ahy17g2913 473 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 7 473 - -
Ahy17g2913 473 Gene3D - 88 387 IPR015915 GO:0005515
Ahy17g2913 473 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 7 473 - -
Ahy17g2913 473 Pfam F-box domain 42 81 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2913 Ahy-Chr17 128811319 128814550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2913 41 260 EF-hand Containing Proteins AT4G39560 27.149 2.80e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2913 - - gmx:100806691 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2913 17 128811319 128814550 Ahy17g2913 17 128811319 128814550 ECH
Ahy17g2913 17 128811319 128814550 Ahy8g0623 8 12157901 12161032 hybridization