Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0586 ATGGATATAAACAGAATCCAATTAGCTCTGCGCTCTTGTGGGATCTTTCAATCTATCAAACACGCCAAATCACTTCACTCTTGCATCATAAAACTTGGCTTTCTGAATCATGTTTTCCCCGTAAACAACATGATCTCTGTCTATGCAAAGTGTCTCCATGTAGATGATGCGCGAAACCTGTTTGACGAAATGCCTCACAGAAACATCGTTACTTGGACCACAATGCTCTCTGCATACACCAATTCTGGGAGTCCCCACGTGGCCCTTTCGCTTTACAATCAGATGCTGCAATCTGAAACAGAGGAGCCCAATGGGTTCTTGTACTCTGCGGTTCTCAAGGCGTGTGGTCTAGTGGGTGATGTTGAACTGGGTAGGTTTGTTCACCAGCATGTAGCTCAGGCAAAAATGGAATTTGACACTGTTCTGATGAATGCACTTTTGGACATGTATGTCAAATGTGGGAGCTTGAAGGATGCAAAGCAAGTTTTTTATGAGACCCCACTTAAGAATTCGACTTCATGGAACACGCTCATTCTGGGTCATGCTAAAAGTGGCTTGGTGGGCGATGCTCTGAAGCTGTTTGATCAAATGCCGGAACGTGATATTGTTTCTTGGAATAGCATCGTTGCTGGTCTAGCAAGTACTGGAAGCCCCCATGCATTACAGTTTGTTGCTAGGATGCACGTGCTAGGCTTTAAACTAGATGAGTTCACATTCCCACGCGCTCTCAAAATTTGTGGTCAGGTTGGTGAAATAGCAACGGGGAAACAAATTCATTGTTATGTTATCAAGTCAGGGTTTGAGTCTTGCAGTTACTGTATATCAGCGTTGATTGATATGTATTCCAATTGCAAGTTATTGGATGAAGCAATGTTGATCTTTGATCAGTTCTTCGACAATTCTTTTGTTGTCGAAAGCTTGGCAATTTGGAATTGTATGCTTTCTGGGTATGTTGTCAATGGGGATTATGGAAAGGCTCTTAGTCTGATTGCACATATCCATAAAACTGGTGCATATTTCGATTCTTATACCTTTAGTATTGCTTTAAAGGTTTGTATGTACTTCCAGAACTTGAGGTTGGTATCTCAGGTGCATAGTTTGGTCATCACAAGTGGCTATGAGTTAGATTGCGTTATTGGAAGCATTCTTATTGATCTTTATGCGAACCAGGGGAATATTAATATTGCTTTGAGATTGTTTGAAAAGTTGCCAGAAAAAGATGTTGTGGCTTGGTCCAGTGTGATTGCTGCTTGTGCTAGATCTGGCTTAAATTCATTGGCTTTATCCCTCTTTATGAATATGACTCGTATGGATCTTGAGATTGACCATTTTATCCTTACAGTTGTTCTTAAAGTTTGTTCAACCTTGGCATCTGAGAGAATTGGAAAGCAAATTCATGCTAACTGTCTTAAAAAGGGATATGAATCAGAGGGAGTTATTGCAACTGCTCTTATTGATATGTACTCAAAATGTGGTGACATTGAGGATGCCTTAGCGTTGTTTGGCTGTCTTTCAGAAAGAGACACTATGTGTTGGACAGGGATTATTGTTGGATGTGCACAAAATGGAAGAGTAGACGAGGCAATCAATCTTCTGCATGAGATGATAGAATCTGGTGAAAAGCCAAATGAAATCACCATTCTAGGTGCTCTTACGGCTTGTAGGCATGGTGGCCTAGTTGAAGAGGCATGGGCCATATTTGATTCTGTTGAAACAGACCATGGATTGAAAAGGTGCCTAGAGCATTACAGTTGTATGGTTGATCTACTTGGTCAAGCAGGACGCTTCGAAGAAGCACTAAAATTGATTAGTGACATGCCATTTAAGCCTGACAAGACGATATGGTTCTCCTTGCTTGGCGCTTGTGGAACTCACAAGAACCAGTATCTTGCTAATGTTGTTGCTGAGCATCTTCGTGCTACATTTCCAGAAGATGCTTCTGTATATGTAATGCTGTCAAACGTTTATGCAACTCTTGGAATGTGGGATAGTTTAAGCGAAGCAAGGGAAGCCTTGAAAAAAGTAGGCTTAAAAGGAGCTGGTAAAAGCTGGATTGAGATCTCAAGTTGA 2070 0.413 MDINRIQLALRSCGIFQSIKHAKSLHSCIIKLGFLNHVFPVNNMISVYAKCLHVDDARNLFDEMPHRNIVTWTTMLSAYTNSGSPHVALSLYNQMLQSETEEPNGFLYSAVLKACGLVGDVELGRFVHQHVAQAKMEFDTVLMNALLDMYVKCGSLKDAKQVFYETPLKNSTSWNTLILGHAKSGLVGDALKLFDQMPERDIVSWNSIVAGLASTGSPHALQFVARMHVLGFKLDEFTFPRALKICGQVGEIATGKQIHCYVIKSGFESCSYCISALIDMYSNCKLLDEAMLIFDQFFDNSFVVESLAIWNCMLSGYVVNGDYGKALSLIAHIHKTGAYFDSYTFSIALKVCMYFQNLRLVSQVHSLVITSGYELDCVIGSILIDLYANQGNINIALRLFEKLPEKDVVAWSSVIAACARSGLNSLALSLFMNMTRMDLEIDHFILTVVLKVCSTLASERIGKQIHANCLKKGYESEGVIATALIDMYSKCGDIEDALALFGCLSERDTMCWTGIIVGCAQNGRVDEAINLLHEMIESGEKPNEITILGALTACRHGGLVEEAWAIFDSVETDHGLKRCLEHYSCMVDLLGQAGRFEEALKLISDMPFKPDKTIWFSLLGACGTHKNQYLANVVAEHLRATFPEDASVYVMLSNVYATLGMWDSLSEAREALKKVGLKGAGKSWIEISS* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0586 689 SUPERFAMILY TPR-like 467 662 IPR011990 GO:0005515
Ahy8g0586 689 Pfam PPR repeat 511 539 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 275 296 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 381 407 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 582 606 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 409 437 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 173 202 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 309 330 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 482 506 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat 142 165 IPR002885 -
Ahy8g0586 689 Pfam PPR repeat family 67 115 IPR002885 -
Ahy8g0586 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 508 542 IPR002885 -
Ahy8g0586 689 Gene3D Tetratricopeptide repeat domain 476 689 IPR011990 GO:0005515
Ahy8g0586 689 Gene3D Tetratricopeptide repeat domain 241 357 IPR011990 GO:0005515
Ahy8g0586 689 Gene3D Tetratricopeptide repeat domain 3 120 IPR011990 GO:0005515
Ahy8g0586 689 Gene3D Tetratricopeptide repeat domain 358 468 IPR011990 GO:0005515
Ahy8g0586 689 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 83 684 - -
Ahy8g0586 689 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 9 76 - -
Ahy8g0586 689 Pfam E motif 625 686 IPR046848 -
Ahy8g0586 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Ahy8g0586 689 PANTHER BNAC03G28070D PROTEIN 9 76 - -
Ahy8g0586 689 PANTHER BNAC03G28070D PROTEIN 83 684 - -
Ahy8g0586 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 407 441 IPR002885 -
Ahy8g0586 689 Gene3D Tetratricopeptide repeat domain 121 229 IPR011990 GO:0005515
Ahy8g0586 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 68 102 IPR002885 -
Ahy8g0586 689 TIGRFAM PPR: pentatricopeptide repeat domain 583 606 IPR002885 -
Ahy8g0586 689 TIGRFAM PPR: pentatricopeptide repeat domain 309 337 IPR002885 -
Ahy8g0586 689 TIGRFAM PPR: pentatricopeptide repeat domain 173 203 IPR002885 -
Ahy8g0586 689 TIGRFAM PPR: pentatricopeptide repeat domain 70 98 IPR002885 -
Ahy8g0586 689 TIGRFAM PPR: pentatricopeptide repeat domain 511 544 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0586 Ahy-Chr8 11472266 11478050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0586 1 687 Glycoside Hydrolase AT3G49170 29.943 1.19e-105 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0586 - - gmx:100780678 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2872 17 128059579 128070431 Ahy8g0586 8 11472266 11478050 hybridization