Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0508 ATGGAAGTGCCGGAGTGCCCGGTGTGCCTCGAACGCTACGACAACCAAGTTTCCATCCCTAGGGTCCTATCTTGCGGTCACTCCGTCTGCGAAGCATGCCTCGTGGAGCTTCCGCTGCGGTTCCCGAACACGATTCGGTGCCCGGCGTGTACACAGCTCGTTAAGTACTCTTCAGAGCAAGGACCTTCGTCTCTTCCAAAGAACATCGACCTTCTCAGGCTTTGCCTCTCTTCATCATCTTCTTCTTCTTCGCGATCGGTGAAACCGACTCAACGGTCAACGATCGACGGTTGTGATGATCGGTCTGTAATTCGAGATCGGTTCTGGTCCGACGAGTTCTATGCCAAGTGGAAGGACTGGATTCTCCCGCACGACGCAGTTTCGGTGGAGTCCCGACCTGAACCCGAATCCGAACCCAGCGGGTTTGTGTTGCGAGGGCAATTTGGTTCGAGTTCTTCGTTGAAGGGTAGGGTTAGTGTTTGTTCTCGAAATAGCAAGTGTTTGAGCCTTGTTCCTGTTTTTTCTTTACCTCGTGTTTTGAATTGTTCGAAGTTTAAGTTCAGTTATGCTGCGAGGATTATGGAATGTTTGGTGGGGATGAAGGAGGCTGTGAGGGAGGAGTTAGCTTTGATTCTAGAAGCTTCTGTGAGGCAGGGCAGGGTTTTTAGGGTTTATGGGTTGTGGAGTGAAGTGGAGGTAGTGGATGGGTCATTGTACCTGGTGTGTGAGAGGCACAATGGTGGTAGCATTTTGCAGAAGTTTGGTGAATTGAAGAATGGGTTCCTTGGTTTGGGATTGGAAGATAAAAAAGATGGGATTTTAAGCTTTGCTGTGATTGGGAAGAGTGTGTGTGATTCTATGCTGGCTTTGCATTTGGAAGGTTTGGCTGCTGGTTGTTTAGGACCTTCGTGCTTTGCTTTCGATGAGCTTGGTGGTGTTTGTGTTGATTTGAATGAGGTTTTGGTTATGAGAAGGAAGACTGTGTATAGTTTTTCTGGTGGCAACAAGAAGGATGCTGCTGTTAATCCGGAGGATGAGCATTCCAGATATCCGTTCGGGTATGGCTCAGATGTGTGGTCATTGGCTTGTGTGCTGTTGTGGCTTCTCATTGGAGATGCACTCCCTCAGATTCCCTTTGAAATGAGTGAAGAGAATGGCTTTGACTTATCAGCTAGTTATGTTTGTTGGGTGGAGAAAGTTAGTTCTGTTTTGGAAGACAAACTTGGCTCTGAATATCCGTCATTGAGGGGGACACTTTGCAAATGTTTGGACATGAATCCGGGAAACCGCATGAGTGTGGTGGATGTGCGGAAGTGCATTCAGGATATGTTACTCAAACCTGAATTCGATTTTCTGGAAAACTTGGAGGTCATGGTTAATCGGAGCAGCACTGGTTGCTGCTTGGTTCTTGATGAGTTGAATGAAAAAGAAGACAATGGGCCACCAGATGTTGTTGATGGGGAAGAGAAACCCGATGCAGATTTGGTTGCTAGCTTATCTAAGGGAATGGCTGAACTTAAAGATCTGCGAGGACATCTGGATTGTATCTCTGGATTAGCAATTGGCGGGGGATATCTGTTTAGCTCTTCGTTTGATAAAACTGTCAAAGTATGGTCGTTGCTGGACTTTTCTGTTTCACACACGTTTAAAGGTCATGAGGATAAAGTCATGGCTATAGTTTATGTAGATGATAAAGAACCATTGTGTGTAAGTGGTGATAATGGAGGGGGCATATTTGTCTGGGGACTTTCTGCTCCTCTCAGGCAAGACCCCTTAAGGAAATGGTATGAGCAGAAGGATTGGCGCTTCAGTGGTATCCATTCGTTAACTGTTTCAGCAAGTCGTTGTCTCTACACCGGAAGTGGAGATAGAACAATAAAAGGTTGGTTGTTAAAGGATGGAACTTTGATGTGCACAATGACTGGTCATAGGTCTGTAGTTTCCACTCTTGTAGTGTGTGATGAGGTTCTTTACAGTGGTAGTTGGGATGGAACCATTCGGTTGTGGAGTCTTAGCGATCACAGCCCATTGACAGTGCTAGGGGAAGGTATGCCTGGAGAAATGAAGTCTATCCTAGCTATTACTGTTGATAGACATTTGCTTGTTGCGGCGTATGAGAACGGCTGCATAAAGGTATGGAGAAATGATGTGTTCATGAGTTCCAAATCATTACATAATGGTGCCATTTTTGCTATGAGCATGCAAGGGCAATGCCTTTATACAGGTGGCTGGGACAAAAATATAAATATACAGGAATTAGCTGGAGACGACGAATTGGAAGTCAGAGCATTCGGTACCATTTCTTGCAGTTCTGTTGTAACGGCTATTTTAAGCTGTCAAGGAAAACTTTTTGTTGGATATGCTGACAAGTCTATCAAGGTTTATCGTGGTAAATGGTAA 2400 0.455 MEVPECPVCLERYDNQVSIPRVLSCGHSVCEACLVELPLRFPNTIRCPACTQLVKYSSEQGPSSLPKNIDLLRLCLSSSSSSSSRSVKPTQRSTIDGCDDRSVIRDRFWSDEFYAKWKDWILPHDAVSVESRPEPESEPSGFVLRGQFGSSSSLKGRVSVCSRNSKCLSLVPVFSLPRVLNCSKFKFSYAARIMECLVGMKEAVREELALILEASVRQGRVFRVYGLWSEVEVVDGSLYLVCERHNGGSILQKFGELKNGFLGLGLEDKKDGILSFAVIGKSVCDSMLALHLEGLAAGCLGPSCFAFDELGGVCVDLNEVLVMRRKTVYSFSGGNKKDAAVNPEDEHSRYPFGYGSDVWSLACVLLWLLIGDALPQIPFEMSEENGFDLSASYVCWVEKVSSVLEDKLGSEYPSLRGTLCKCLDMNPGNRMSVVDVRKCIQDMLLKPEFDFLENLEVMVNRSSTGCCLVLDELNEKEDNGPPDVVDGEEKPDADLVASLSKGMAELKDLRGHLDCISGLAIGGGYLFSSSFDKTVKVWSLLDFSVSHTFKGHEDKVMAIVYVDDKEPLCVSGDNGGGIFVWGLSAPLRQDPLRKWYEQKDWRFSGIHSLTVSASRCLYTGSGDRTIKGWLLKDGTLMCTMTGHRSVVSTLVVCDEVLYSGSWDGTIRLWSLSDHSPLTVLGEGMPGEMKSILAITVDRHLLVAAYENGCIKVWRNDVFMSSKSLHNGAIFAMSMQGQCLYTGGWDKNINIQELAGDDELEVRAFGTISCSSVVTAILSCQGKLFVGYADKSIKVYRGKW* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0508 799 PRINTS G protein beta WD-40 repeat signature 526 540 IPR020472 -
Ahy8g0508 799 PRINTS G protein beta WD-40 repeat signature 617 631 IPR020472 -
Ahy8g0508 799 PRINTS G protein beta WD-40 repeat signature 657 671 IPR020472 -
Ahy8g0508 799 SUPERFAMILY Protein kinase-like (PK-like) 217 448 IPR011009 -
Ahy8g0508 799 SMART ring_2 6 50 IPR001841 -
Ahy8g0508 799 SMART WD40_4 760 796 IPR001680 GO:0005515
Ahy8g0508 799 SMART WD40_4 588 630 IPR001680 GO:0005515
Ahy8g0508 799 SMART WD40_4 633 670 IPR001680 GO:0005515
Ahy8g0508 799 SMART WD40_4 715 752 IPR001680 GO:0005515
Ahy8g0508 799 SMART WD40_4 673 714 IPR001680 GO:0005515
Ahy8g0508 799 SMART WD40_4 502 539 IPR001680 GO:0005515
Ahy8g0508 799 SMART WD40_4 542 582 IPR001680 GO:0005515
Ahy8g0508 799 ProSiteProfiles Trp-Asp (WD) repeats profile. 640 679 IPR001680 GO:0005515
Ahy8g0508 799 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 86 IPR013083 -
Ahy8g0508 799 Gene3D - 589 798 IPR015943 GO:0005515
Ahy8g0508 799 ProSiteProfiles Trp-Asp (WD) repeats profile. 509 548 IPR001680 GO:0005515
Ahy8g0508 799 SUPERFAMILY RING/U-box 5 58 - -
Ahy8g0508 799 PANTHER FINGER (CCCH TYPE) PROTEIN, PUTATIVE-RELATED 2 795 - -
Ahy8g0508 799 Gene3D Transferase(Phosphotransferase) domain 1 213 444 - -
Ahy8g0508 799 Pfam zinc-RING finger domain 5 52 IPR001841 -
Ahy8g0508 799 Pfam WD domain, G-beta repeat 636 670 IPR001680 GO:0005515
Ahy8g0508 799 Pfam WD domain, G-beta repeat 506 539 IPR001680 GO:0005515
Ahy8g0508 799 ProSiteProfiles Zinc finger RING-type profile. 6 51 IPR001841 -
Ahy8g0508 799 PANTHER - 2 795 IPR044715 -
Ahy8g0508 799 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 640 672 - -
Ahy8g0508 799 CDD RING-HC_TRIM32_C-VII 5 51 - -
Ahy8g0508 799 SUPERFAMILY WD40 repeat-like 504 796 IPR036322 GO:0005515
Ahy8g0508 799 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Ahy8g0508 799 Gene3D - 483 586 IPR015943 GO:0005515
Ahy8g0508 799 ProSiteProfiles Protein kinase domain profile. 137 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0508 Ahy-Chr8 10137222 10141130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0508 524 766 Acyl Lipid Metabolism Gene Families AT3G18860 28.125 2.35e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0508 - K03070 lja:Lj1g3v0874380.1 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2787 17 126384225 126402909 Ahy8g0508 8 10137222 10141130 hybridization