Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0470 ATGGTTGGAAAGGAGAACCTGAGAACTGAGGACTTGAACTTGTGCTTTGAGAAGCTCATGATGGTTGCTGGTGGTGGTGGTGGTGGTTGTGGTGGTGAGAAAGGAGGGAAGATGAAAGCCGGGGTGATCACTGAGTGGAAGGATATTCCTGTGGAGCTTTTGATGCAGATTTTGTCCCTTGTGGATGATCAAACTGTGATCACAGCTTCTGGTGTTTGTCGTGGATGGAGAGATGCTATTTACTTTGGCCTTGCTCGTTTGTCACTCTCATGGTGTAGCAAGAACATGAATAACTTGGCCCTTTCTCTTGTTCCGAAATTCACAAAACTTCAAACTCTAATCCTTCGTCAAGACAAGCCTCAACTAGAGGATAACACAGTTGAAAGGATTGCAAATTATTGTCATGACCTGCAGATTCTGGACCTGAGTAAAAGCTTCAAACTCACCGATCGGTCGCTGTATGCCGTAGCCCACGGTTGTCCTGATCTCACTAAACTCAACATCAGTGGCTGCTCTGCTTTTAGTGACAATGCTCTGGCGTACCTTGCCGGTTTCTGCAGGAAGCTGAAAGTCCTAAACCTCTGCGGATGCGTTAGAGCAGCAACCGATACTGCGTTACAGGCTATTGGACACTACTGTAATCAGTTACAGTCTTTGAACCTTGGATGGTGTGAGAATGTTGGTGATGTTGGAGTGATGAGTTTAGCATATGGCTGTCCTGATCTAAGAATAGTGGACCTGTGTGGCTGTGTCCTTATAACAGATGATAGTGTGATTGCATTGGCAAGCAGATGCCCAAGGCTCAGGTCCCTAGGACTATACTACTGCAAGAACATAACAGATAGGGCAATGTACTCATTGGCACAGAGCAAAGTGAACAAGAGAATGTGGGGATCAGTGAAAGGAGGAGGAGGAGGAAATGATGAAGACGGGCTTAGAACTCTCAACATAAGCCAATGCACAGCACTGACACCATCTGCAGTTCAAGCTGTTTGTGACTCATTCCCTTCACTCCACACATGCTCAGGTAGACACTCACTCATCATGAGTGGTTGCCTCAACTTGACTTCAGTTCATTGTGCTTGTGCTGTTCATGCTCACCGTGCTATCAACAATTTCCCTCACCCTGCTCATTGA 1137 0.4635 MVGKENLRTEDLNLCFEKLMMVAGGGGGGCGGEKGGKMKAGVITEWKDIPVELLMQILSLVDDQTVITASGVCRGWRDAIYFGLARLSLSWCSKNMNNLALSLVPKFTKLQTLILRQDKPQLEDNTVERIANYCHDLQILDLSKSFKLTDRSLYAVAHGCPDLTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAATDTALQAIGHYCNQLQSLNLGWCENVGDVGVMSLAYGCPDLRIVDLCGCVLITDDSVIALASRCPRLRSLGLYYCKNITDRAMYSLAQSKVNKRMWGSVKGGGGGNDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHRAINNFPHPAH* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0470 378 Pfam Leucine Rich repeat 213 236 IPR001611 GO:0005515
Ahy8g0470 378 Gene3D Ribonuclease Inhibitor 86 301 IPR032675 -
Ahy8g0470 378 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 360 - -
Ahy8g0470 378 SUPERFAMILY RNI-like 265 357 - -
Ahy8g0470 378 SUPERFAMILY F-box domain 44 81 IPR036047 GO:0005515
Ahy8g0470 378 PANTHER UNCHARACTERIZED 1 360 - -
Ahy8g0470 378 SUPERFAMILY RNI-like 83 289 - -
Ahy8g0470 378 Pfam F-box-like 47 80 IPR001810 GO:0005515
Ahy8g0470 378 SMART LRR_CC_2 213 238 IPR006553 -
Ahy8g0470 378 SMART LRR_CC_2 134 159 IPR006553 -
Ahy8g0470 378 SMART LRR_CC_2 107 133 IPR006553 -
Ahy8g0470 378 SMART LRR_CC_2 265 290 IPR006553 -
Ahy8g0470 378 SMART LRR_CC_2 309 334 IPR006553 -
Ahy8g0470 378 SMART LRR_CC_2 160 185 IPR006553 -
Ahy8g0470 378 SMART LRR_CC_2 186 212 IPR006553 -
Ahy8g0470 378 SMART LRR_CC_2 239 264 IPR006553 -
Ahy8g0470 378 Gene3D - 43 85 - -
Ahy8g0470 378 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0470 Ahy-Chr8 9443244 9446571 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0470 K03875 - gmx:100797840 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2724 17 125243088 125246536 Ahy8g0470 8 9443244 9446571 hybridization