Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0449 ATGAGTCACAGAGGAATGGACGACGATGATGAGGAGGAGTACGAGGAGGACGAGCAGGTAGCCGACTTCGATGAGGAGGCAGAGGAGGAAGAGGACGATAGGGGGCGCGGCAGCGGCGGCAGGAAGCGTCGGAGATCTGATTTCATCGATGATGATGCTGAGGAGGTGGATGAGGATGAGGAGGAGGAGGACGATGACGATGATTATGGGGGTGGTGGCGGCCGCAGGCGCCAGAATAGGAAAGCCTCTGCTTCTCATTTCTTCGATGACATAGCGGAGGTGGATTCAGATGGGGAAGAAGAAGAAGAGGAAGGGGAGGACGATTTCTTTGTTGATAATGGAAATGATATTCCTGAGGACAATGTCAGTAGGAGCAGACTTCATAGGCCTTTGCATGAGCAAGATAATGAAGATTTTGAAGCTTTAGAAAGACACATCCAGGAAAGATATGCAAGGCGTGTGGAATCTTTTGATGAAGAGGCTACAGATGTAGAACAGCAAGCTCTTTTGCCATCTGTTAGAGATCCAAAGCTGTGGATGGTGAAATGTCAGATTGGTCATGAGAGAGAGACAGCTGTTTGCCTTATGCAAAAGTATATAGATAAGGGGGCTGAATTGCAAATCAGGTCAGCTATTGCCCTTGATCATCTTAAAAACTATATTTATGTGGAAGCAGATAAAGAGGCCCACGTGAGAGAGGCTATTAAGGGTTTAAGGAACATATATGGGGCGTCAAAAATAACACTAGTTCCAATAAGAGAAATGACGGATGTGCTGTCAGTTGAAAGCAAAGCAATTGATCTTGCCAGAGATACTTGGGTCAGAATGAAGATTGGCACATATAAAGGGGACCTTGCCAAGGTAGTTGATGTTGATAATGTGAGGCAGAGGGTTACGGTGAAACTGATTCCAAGGATAGACTTGCAGGCGCTTGCAAATAAACTGGAAGGTAGAGAAGTTGTGAAAAAGAAGGCGTTTGTCCCTCCTCCTCGTTTTTTAAATGTTGATGAAGCTAGGGAACTGCATATTCGTGTCGAGCATAGACGTGATGCCTATGGGGAAAGATTTGATGCTATTGGAGGAATGATGTTTAAGGATGGATTCTTGTACAAAACTGTATCAATAAAATCCATTAATGCTCAAAACATCAAACCTACTTTGAATGAACTTGAAAAATTTCGAAAACCTGGTGAGAGTGGTGACAGCGATGTAGCAAGTCTGTCAACTTTGTTCGCTAACAGAAAGAAAGGCCATTTTATGAAAGGTGATGCTGTAATTGTTGTGAAGGGTGATTTGAAGAAGTTGAAGGGGTGGGTGGAGAAAGTAGATGAAGATAATGTTCATATAAGACCAGAATTGAAGGGTCTTCCTAAAACCCTTGCTGTAAATGAAAGGGAACTTTGTAAATATTTTGAACCTGGAAACCACGTTAAGGTTGTTACTGGTGCTCAAGAGGGTGCTACCGGCATGGTTGTGAAGGTGGAACAGCATGTATTGATTCTATTATCCGACACAACAAAAGAACATATCCGTGTGTTTGCAGATGATGTTGTGGAGAGTTCTGAAGTGACCACTGGAATTACAAAAATTGGGGACTATGAACTTCGTGATCTTGTATTGTTAGATAATATGGACTTTGGTGTAATAATTCGTGTAGAAAGCGAGGCATTTCAGGTTCTTAAGGGGACTGCAGACAGGCCTGAAGTTGCACTTGTTAAATTAAGAGAGATTAAATGCAAGGTAGAGAAGAAAATAAATGCGCAGGATAAGCATAAGAATACAATCTCAGTAAAGGATGTTGTGCGAGTTGTCGAAGGTCCTTGCCATGGTGATGCCTACTCGAGATTCCCTGGCCTTAGAACTCCACCTCGTATTCCCCAGTCCCCAAGAAGGTTTTCACGAGGAGGGCCTCCAATTGATTCTGGAGGAAGGCACAGGGGTGGAAGAGGACACGATGGTTTGGCTGGTGCAACAGTCAAAGTACGCCAGGGTGCTTATAAAGGTTATCGTGGACGTGTAATAGAAGTTAAAGGCACAACAGTTCGGGTTGAATTGGAGTCCCAAATGAAGGTTGTGACGGTTGATCGCAACCATATATCGGATAATGTAGCTGTAACCCCACAGCGTGAAACTCGATATTCGATTGGATGTGAAACCCCAATGCATCCTTCTCGAACTCCCCTACATCCATATATGACCCCTATGAGAGATCCTGGAGCAACTCCTATACATGATGGAATGAGGACACCAAGGCGTGACCGGGCATGGAATCCTTATACCCCAATGAGTCCGACTAGGGACTGGGAAGATGGAAATCCAGGCTCATGGGGAACCAGCCCACAGTCCCAGGCAGGAAGCTCACCTTCACGGCTATATGAAGCCCCCACTCCTGGTGCTGGTTGGGGTAGCACTCCTGGCGGAAACTATAATGAGGCTGGAACACCGCATGACTCATACGTAAATGTTGCAAGCCCATATTTACCATCAACACCTGGTGGGCAGCCTATGACGCCAAATTCTGCGGTGTATCTTCCCAGCACCCCTGGAGGACCACCCATGACTCCAGGAACTGGTGGTCTGGACATGATGTCCCCAGTTTTAGGTGGGGACAATGAGGGGCCATGGTTTATGCCAGACATATTAGTTAATGTACACAGGCCAGGTGAAGAATCTGTTGGAGTTATAAGAGAGGTTCTTCCGGATGGGTCTTGCAAGGTAGCGCTTGGCTCAAGTGGAAATGGTGAAACGATAACTGCCCTTCCCAATGAAATGGAGGCCGTGGTGCCAAGGAAATCAGACAAAATAAAGATAATGGGTGGAGCATTGAGGGGGTCTACAGGCAAGTTGATTGGTGTAGATGGTACTGATGGTATTGTAAAGGTAGATGACACATTGGAAGTCAAGATTTTAGACCTAGTTATTTTGGCTAAATTAGCTCAACCATGA 2946 0.4538 MSHRGMDDDDEEEYEEDEQVADFDEEAEEEEDDRGRGSGGRKRRRSDFIDDDAEEVDEDEEEEDDDDDYGGGGGRRRQNRKASASHFFDDIAEVDSDGEEEEEEGEDDFFVDNGNDIPEDNVSRSRLHRPLHEQDNEDFEALERHIQERYARRVESFDEEATDVEQQALLPSVRDPKLWMVKCQIGHERETAVCLMQKYIDKGAELQIRSAIALDHLKNYIYVEADKEAHVREAIKGLRNIYGASKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFLNVDEARELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSIKSINAQNIKPTLNELEKFRKPGESGDSDVASLSTLFANRKKGHFMKGDAVIVVKGDLKKLKGWVEKVDEDNVHIRPELKGLPKTLAVNERELCKYFEPGNHVKVVTGAQEGATGMVVKVEQHVLILLSDTTKEHIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNMDFGVIIRVESEAFQVLKGTADRPEVALVKLREIKCKVEKKINAQDKHKNTISVKDVVRVVEGPCHGDAYSRFPGLRTPPRIPQSPRRFSRGGPPIDSGGRHRGGRGHDGLAGATVKVRQGAYKGYRGRVIEVKGTTVRVELESQMKVVTVDRNHISDNVAVTPQRETRYSIGCETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPRRDRAWNPYTPMSPTRDWEDGNPGSWGTSPQSQAGSSPSRLYEAPTPGAGWGSTPGGNYNEAGTPHDSYVNVASPYLPSTPGGQPMTPNSAVYLPSTPGGPPMTPGTGGLDMMSPVLGGDNEGPWFMPDILVNVHRPGEESVGVIREVLPDGSCKVALGSSGNGETITALPNEMEAVVPRKSDKIKIMGGALRGSTGKLIGVDGTDGIVKVDDTLEVKILDLVILAKLAQP* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0449 981 SMART nusgn_4 175 262 IPR006645 GO:0140673
Ahy8g0449 981 Gene3D - 639 702 IPR014722 -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 8 32 - -
Ahy8g0449 981 PIRSF Spt5 611 981 IPR017071 GO:0006357|GO:0032784
Ahy8g0449 981 PIRSF Spt5 2 614 IPR017071 GO:0006357|GO:0032784
Ahy8g0449 981 Gene3D - 157 260 IPR036735 GO:0006355
Ahy8g0449 981 PANTHER SUPPRESSOR OF TY 5 29 611 IPR039659 GO:0006357|GO:0032784
Ahy8g0449 981 PANTHER SUPPRESSOR OF TY 5 621 979 IPR039659 GO:0006357|GO:0032784
Ahy8g0449 981 CDD KOW_Spt5_5 654 700 IPR041978 -
Ahy8g0449 981 Pfam KOW motif 473 498 IPR005824 -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 33 50 - -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 119 140 - -
Ahy8g0449 981 SUPERFAMILY Translation proteins SH3-like domain 462 521 IPR008991 -
Ahy8g0449 981 CDD KOW_Spt5_3 470 520 IPR041976 -
Ahy8g0449 981 Gene3D - 473 522 IPR014722 -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 772 790 - -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 1 140 - -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 51 68 - -
Ahy8g0449 981 CDD NGN_Euk 177 260 IPR039385 -
Ahy8g0449 981 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT5 29 611 - -
Ahy8g0449 981 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT5 621 979 - -
Ahy8g0449 981 CDD KOW_Spt5_1 271 308 IPR041973 -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 739 816 - -
Ahy8g0449 981 Pfam Spt5 transcription elongation factor, acidic N-terminal 87 171 IPR022581 -
Ahy8g0449 981 SMART kow_9 652 679 IPR005824 -
Ahy8g0449 981 SMART kow_9 418 445 IPR005824 -
Ahy8g0449 981 SMART kow_9 470 497 IPR005824 -
Ahy8g0449 981 SMART kow_9 267 294 IPR005824 -
Ahy8g0449 981 SMART kow_9 928 955 IPR005824 -
Ahy8g0449 981 ProSitePatterns Ribosomal protein L24 signature. 422 439 IPR005825 GO:0003735|GO:0005840|GO:0006412
Ahy8g0449 981 Pfam Early transcription elongation factor of RNA pol II, NGN section 177 259 IPR005100 -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 614 656 - -
Ahy8g0449 981 Coils Coil 147 167 - -
Ahy8g0449 981 CDD KOW_Spt5_6 922 979 IPR041980 -
Ahy8g0449 981 Gene3D - 413 470 IPR014722 -
Ahy8g0449 981 CDD KOW_Spt5_2 419 469 IPR041975 -
Ahy8g0449 981 MobiDBLite consensus disorder prediction 93 114 - -
Ahy8g0449 981 Gene3D - 267 309 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0449 Ahy-Chr8 9026909 9034584 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0449 K15172 - gmx:100801380 1521.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2698 17 124555281 124563092 Ahy8g0449 8 9026909 9034584 hybridization