Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0356 ATGCCAACACCAGCTTTCACTTTCTACTCTACAATGTCAGCTTCAGCTTCGTTTCTTGCTCCGTCCCCCTCTTTCGCTCCATTCAGGGGTTGCAAAGAGGTTCCACGTATGTTTTCAGTGTCTAACAAAAAGGAGAATCGCACTTCAAAGCTTTACATTATACCCATCACCACTGTTACTCGCTTTTGTGCCTCAACAGCTTCACTTGAGTCCTTGCACTTTGCTGACACTAATGCTAATCAAAATCACAGAATAAACGAATTTGAGAATGAGTTGAACGAGTTCTTTGATGAAGTGAAAACAATGATTAGAATGGGAAAAAGAGATGATGCTCTTGACCTACTTAATGCCGGCTCTAAAGGCATTCAAGAAGCTGCAATTCTGGATGTCTTAGCGCTGGGTTATGTGGCTGTTGGAGACCTAGAAACTGTTGCTTCTCTGTTGAATGTGATGAGAAAAGTGATTGACAATTTGAAGGATGACACACAACATCTAGATTTGATACTTACGCATATGGGAAGTATGTATTCAACATTGAGCAAGTTTGGAAAATCACTGGACACGTATCAAAGGGCTTTCAACATTATGGAAAGGACCTATGGTAACGACAGCCCTTTTCTTGTCACACCCTATTTGGCTATGGCAAAGGTTCTTGGTTCAACTGGAAAAGCAACAAAAGCCATAGAGAAATACCAGTGTGCAATAACTATTTTGGAGTCTAAGAGAGGTGCTGAAAGTAAGGATTTGGTTGTACCTTTACTTGGTCTTGGCAATCTTTTACTGAAAGAAAGAAGAGTCAACGATGCAGAAACTCATTTTACTAGGGTTCTCGACATATACACAAAGTCATATGGACAAAATGATGGAAGAATTGGATTGGCCATGAGTTCCCTTGCCCAAGTTAAGTGTGCTCAAGGGAAGTCAGATGAAGCAATCAATTTGTATGAACATGCACTTCATGTCATGAAAGATTCCAATTACTTGTCGCCAGATGACAGCATCATGGAAAAGATGAGGGTAGATCTTGCTGAGTTGCTTCATGCTGTCGGGAGAGCACAAGAAGGCAGAGAATTATTAGAGGAATGCTTATTAATCACAGAGAGGCACAAAGGAAAAGGTCACCCCGGCTTAGTGACACACATGATAAATCTTGCAACTTCATATTCCCAATCGAAGAATTATGCAGAGGCCGAGCACTTGTTGAAGAGTTTGGAAATAATGATAAAGCAGAAAGGAAGCGATGACCAGTTCGTCAGCTTTCCAATGTTGCAACTTGCAGTTACGCTTCACCATTTGAAACAAGATGAAGAAGCTGAGAAACTGGCACTGGATGCTTTGCGCATCCGTGAGAAGGCATTTGGAGAAGATTCTCTTCCAGTTGGGGAGGCTTTGGACTGTTTGGTGTCTATTCAAACTCAAGTTGGTAAAGATGAGAGCGAGTTAGTTGTGCTACTTAGAAGGATTCTAGGTATACAAGAGAGAGAATTTGGATACGAGAGTGAGGAAGTTTTGGTTACAGTGAAAAAGATTGTATTCTTGTTGGATAAACTAGGGAGAAGAGATGAAATGCTTCCCTTGCAGAGGAGGTTGTCTCTGCTTAGAAAGAAGTATAAGCAGATGATTCATCACTGA 1632 0.4118 MPTPAFTFYSTMSASASFLAPSPSFAPFRGCKEVPRMFSVSNKKENRTSKLYIIPITTVTRFCASTASLESLHFADTNANQNHRINEFENELNEFFDEVKTMIRMGKRDDALDLLNAGSKGIQEAAILDVLALGYVAVGDLETVASLLNVMRKVIDNLKDDTQHLDLILTHMGSMYSTLSKFGKSLDTYQRAFNIMERTYGNDSPFLVTPYLAMAKVLGSTGKATKAIEKYQCAITILESKRGAESKDLVVPLLGLGNLLLKERRVNDAETHFTRVLDIYTKSYGQNDGRIGLAMSSLAQVKCAQGKSDEAINLYEHALHVMKDSNYLSPDDSIMEKMRVDLAELLHAVGRAQEGRELLEECLLITERHKGKGHPGLVTHMINLATSYSQSKNYAEAEHLLKSLEIMIKQKGSDDQFVSFPMLQLAVTLHHLKQDEEAEKLALDALRIREKAFGEDSLPVGEALDCLVSIQTQVGKDESELVVLLRRILGIQEREFGYESEEVLVTVKKIVFLLDKLGRRDEMLPLQRRLSLLRKKYKQMIHH* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0356 543 SMART tpr_5 250 283 IPR019734 GO:0005515
Ahy8g0356 543 SMART tpr_5 419 452 IPR019734 GO:0005515
Ahy8g0356 543 SMART tpr_5 292 325 IPR019734 GO:0005515
Ahy8g0356 543 SMART tpr_5 208 241 IPR019734 GO:0005515
Ahy8g0356 543 SMART tpr_5 166 199 IPR019734 GO:0005515
Ahy8g0356 543 SUPERFAMILY TPR-like 166 282 IPR011990 GO:0005515
Ahy8g0356 543 SUPERFAMILY TPR-like 247 397 IPR011990 GO:0005515
Ahy8g0356 543 Coils Coil 78 105 - -
Ahy8g0356 543 Pfam MalT-like TPR region 222 448 IPR041617 -
Ahy8g0356 543 Gene3D Tetratricopeptide repeat domain 106 335 IPR011990 GO:0005515
Ahy8g0356 543 Gene3D Tetratricopeptide repeat domain 336 543 IPR011990 GO:0005515
Ahy8g0356 543 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 89 528 - -
Ahy8g0356 543 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 89 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0356 Ahy-Chr8 7366214 7369914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0356 - - aprc:113852595 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2567 17 121324827 121328801 Ahy8g0356 8 7366214 7369914 hybridization