Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0040 ATGGGTGAACAAACACTAGGTCAAGAACAATCCCTAACACCAACCCCGATTGACCCTCCACCTCAACCTCCCTCCAACACCCCCGCTGCCGCGCCTGTCATCGAGACCACCACCGTTGCCAACGCCACCATTGCTCATGTTTCCCCCACAGAATCCGAACTGAGCAACAATAATGCTCCTCCTCCGCCAACAAACCCTACCGCACCACCTTCCAAAATCCCCCTCCGCCCTCGCAAGATCCGGAAGCTCTCCCCTGACCCCGCCGTCTCCCAGCCTCAATTGTCCTCTGCCGCCATCACTGAACCTCCAAAACCAACCTCATCCTCCAACTCGTCCTCCGCAGCCAAGTCTGCCAGCCGGAGCACCAAAACCGCTCAGCAGCAGCAGCAGCAACAGCAACAACAACAACGAGCCCTAGCGGTTCCGAGGGTTGTAGCGAGGTCGCTATCGTGCGAAGGAGAGGTGGAGATCGCACTCCGCTACCTCCGCAACTCGGATCCGCTCCTCTCCCCTCTAATCGACATCCACCAAGCACCAACCTTCGACAATTTCCACACCCCTTTCCTTGCCCTAACGCGCAGCATTCTCTATCAGCAGCTCGCCTATAAGGCTGGAACCTCTATCTATACTCGATTCATCTCTCTCTGCGGCGGCGAAGCCGGCGTTGTTCCTGAAACCGTTCTTGCCCTAACTCCTCAGCAGCTCCGCCAAATTGGGGTTTCTGGAAGGAAGGCCAGTTACCTTCACGACTTGGCCAGGAAGTACCAGAATGGGATACTCTCCGATTCGGCCATTGTAAATATGGATGATAAATCTCTGTTCACCATGCTCACAATGGTGAACGGGATTGGGTCCTGGTCTGTTCATATGTTCATGATATTCTCACTCCATAGACCCGATGTTCTTCCCATCAACGATCTTGGAGTCCGCAAAGGGGTTCAGCTTCTCTACAATCTTGAGGACTTGCCCCGCCCTTCTCAGATGGATCAGTTGTGTGAGAAATGGAGGCCTTATCGCTCTGTTGCTTCGTGGTATATGTGGAGATTCGTTGAAGCCAAGGGAACGCCTTCTAGTGCGGTGGCTGTGGCCACTGGTGCGAGTTTGCAGCACCACCAGCAGGAGCAGCAGCAGCAACAGCAGCAGCACCCTTCACAGCCTCAGCTTCTGGATCCCATAAACACCATGTTTAATATGGGGGCGGCCTGTGCTTGGGGACAATGA 1221 0.5479 MGEQTLGQEQSLTPTPIDPPPQPPSNTPAAAPVIETTTVANATIAHVSPTESELSNNNAPPPPTNPTAPPSKIPLRPRKIRKLSPDPAVSQPQLSSAAITEPPKPTSSSNSSSAAKSASRSTKTAQQQQQQQQQQQRALAVPRVVARSLSCEGEVEIALRYLRNSDPLLSPLIDIHQAPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFISLCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGASLQHHQQEQQQQQQQHPSQPQLLDPINTMFNMGAACAWGQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0040 406 MobiDBLite consensus disorder prediction 29 58 - -
Ahy8g0040 406 SMART endo3end 196 351 IPR003265 GO:0006284
Ahy8g0040 406 MobiDBLite consensus disorder prediction 368 390 - -
Ahy8g0040 406 Pfam HhH-GPD superfamily base excision DNA repair protein 193 336 IPR003265 GO:0006284
Ahy8g0040 406 SUPERFAMILY DNA-glycosylase 180 349 IPR011257 GO:0003824|GO:0006281
Ahy8g0040 406 MobiDBLite consensus disorder prediction 88 135 - -
Ahy8g0040 406 PANTHER BNAC05G15000D PROTEIN 64 400 - -
Ahy8g0040 406 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 64 400 - -
Ahy8g0040 406 CDD ENDO3c 188 349 IPR003265 GO:0006284
Ahy8g0040 406 MobiDBLite consensus disorder prediction 59 73 - -
Ahy8g0040 406 Gene3D - 161 348 - -
Ahy8g0040 406 Gene3D Hypothetical protein; domain 2 185 298 - -
Ahy8g0040 406 MobiDBLite consensus disorder prediction 14 28 - -
Ahy8g0040 406 MobiDBLite consensus disorder prediction 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0040 Ahy-Chr8 662840 667108 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0040 K01247 - gmx:100790760 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2387 17 114651706 114655960 Ahy8g0040 8 662840 667108 hybridization