Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2387 ATGGGTGAACAAACACTAGGTCAAGAACAATCCCTAACACCAACCCCGATTGACCCTCCACCTCAACCTCCCTCCAATACCCCCGCTGCCGCGCCTGTCATCGAGACCACCACCGTTGCCAACGCCACCATTGCTCATGTTTCCCCCACAGAATCCGAACTGAGCAACAATAATGCTCCTCCTCCGCCAACAAACCCTACCGCACCACCTTCCAAAATCCCCCTCCGCCCTCGCAAGATCCGGAAGCTCTCCCCTGACCCCGCCGTCTCCCAGCCTCAATTGTCCTCCGCCGCCATCACTGAACCTCCAAAACCAACCTCATCCTCCAACTCGTCCTCCGCAGCCAAGTCTGCCAGCCGGAGCACCAAAACCGCTCAGCAGCAGCAGCAGCAACAGCAACAACAACAACGAGCCCTAGCGGTTCCGAGGGTTGTAGCGAGGTCGCTATCGTGCGAAGGAGAGGTGGAGATCGCACTCCGCTACCTCCGCAACTCGGATCCGCTCCTCTCCCCTCTAATCGACATCCACCAAGCACCAACCTTCGACAATTTCCACACCCCTTTCCTTGCCCTAACGCGCAGCATTCTCTATCAGCAGCTCGCCTATAAGGCTGGAACCTCTATCTATACTCGATTCATCTCTCTCTGCGGCGGCGAAGCCGGCGTTGTTCCTGAAACCGTTCTTGCCCTAACTCCTCAGCAGCTCCGCCAAATTGGGGTTTCTGGAAGGAAGGCCAGTTACCTTCACGACTTGGCGAGGAAGTACCAGAATGGGATACTCTCCGATTCGGCCATTGTAAATATGGATGATAAATCTCTGTTCACCATGCTCACAATGGTGAACGGGATTGGGTCCTGGTCTGTTCATATGTTCATGATATTCTCACTCCATAGACCCGATGTTCTTCCCATCAACGATCTTGGAGTCCGCAAAGGGGTTCAGCTTCTCTACAATCTTGAGGACTTGCCCCGCCCTTCTCAGATGGATCAGTTGTGTGAGAAATGGAGGCCTTATCGCTCTGTTGCTTCGTGGTATATGTGGAGATTCGTTGAAGCCAAGGGAACGCCTTCTAGTGCGGTGGCTGTGGCCACTGGTGCGAGTTTGCAGCACCACCAGCAGGAGCAGCAGCAGCAACAGCAGCAGCACCCTTCACAGCCTCAGCTTCTGGATCCCATAAACACCATGTTTAATATGGGGGCGGCCTGTGCTTGGGGACAATGA 1221 0.5479 MGEQTLGQEQSLTPTPIDPPPQPPSNTPAAAPVIETTTVANATIAHVSPTESELSNNNAPPPPTNPTAPPSKIPLRPRKIRKLSPDPAVSQPQLSSAAITEPPKPTSSSNSSSAAKSASRSTKTAQQQQQQQQQQQRALAVPRVVARSLSCEGEVEIALRYLRNSDPLLSPLIDIHQAPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFISLCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGASLQHHQQEQQQQQQQHPSQPQLLDPINTMFNMGAACAWGQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2387 406 MobiDBLite consensus disorder prediction 29 58 - -
Ahy17g2387 406 SMART endo3end 196 351 IPR003265 GO:0006284
Ahy17g2387 406 MobiDBLite consensus disorder prediction 368 390 - -
Ahy17g2387 406 Pfam HhH-GPD superfamily base excision DNA repair protein 193 336 IPR003265 GO:0006284
Ahy17g2387 406 SUPERFAMILY DNA-glycosylase 180 349 IPR011257 GO:0003824|GO:0006281
Ahy17g2387 406 MobiDBLite consensus disorder prediction 88 135 - -
Ahy17g2387 406 PANTHER BNAC05G15000D PROTEIN 64 400 - -
Ahy17g2387 406 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 64 400 - -
Ahy17g2387 406 CDD ENDO3c 188 349 IPR003265 GO:0006284
Ahy17g2387 406 MobiDBLite consensus disorder prediction 59 73 - -
Ahy17g2387 406 Gene3D - 161 348 - -
Ahy17g2387 406 Gene3D Hypothetical protein; domain 2 185 298 - -
Ahy17g2387 406 MobiDBLite consensus disorder prediction 14 28 - -
Ahy17g2387 406 MobiDBLite consensus disorder prediction 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2387 Ahy-Chr17 114651706 114655960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2387 K01247 - gmx:100790760 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0794 15 11108564 11109798 Ahy17g2387 17 114651706 114655960 ECH
Ahy17g2387 17 114651706 114655960 Ahy15g0794 15 11108564 11109798 ECH
Ahy17g2387 17 114651706 114655960 Ahy17g2387 17 114651706 114655960 ECH
Ahy17g2387 17 114651706 114655960 Ahy8g0040 8 662840 667108 hybridization