Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1042 ATGGGAGATAATCAGAGAATCCACCCTCTTCATCATGACGTTGAATCACCACCATCGCCGCCACCGCCACAACCATCGGCACCTTTGGTGCCAAGGAACATGTCCAGATCGGATAAAGGCGATCCGGAGTTGTCAAATCAACAACCACCGCCTCCTCCGCTGCCTCCTGCTCGCAACAGAAGATCAAGAAGAGGTTGCTGCTGCAAATTCCTCTGTTGGTTTATAAGCATATTGCTTATCCTGGTGGTGGCGATCGGCGCAACGGTGGGTATACTCTATCTTGTGTTCAGGCCGAAGCTTCCGAAATACTCCATCAACGAAATTGGGGTGACAAGATTCGATCTTTCAAACAACGATAGCTTAAGTGTCACATTCAACTTGACAATAACAGCTCGGAATCCAAACAAGAGAATTGGAATCGATTACAGAGGTGGAAGCCACATTAGTGCTTATTACAATGGCACGAAACTCTGTGATGGATCGTTACCAAAATTCTACCAGGGTCACCATAACACTACAGTTCTTAACATTCCTCTTTCAGGGGAAGCAGAAAATGCAACAGCTTTGGAAAATTCGTTGACGCAACAACTGCAGCAAAGTGGAAGTGTTCCTCTTCGGTTGAAGGCGAAGCAACCGGTGAGGATTAAGTTTGGGAAGTTGAAGATATTCAAGATCACCTTCAGGGTTAGGTGCTGGATTGTTGTGGATAATCTTAATGCTAACAACTCCATTAGAATCAAGAGCAGTAGCTGCAAGTTCAGACTCAAGTTATAG 774 0.4548 MGDNQRIHPLHHDVESPPSPPPPQPSAPLVPRNMSRSDKGDPELSNQQPPPPPLPPARNRRSRRGCCCKFLCWFISILLILVVAIGATVGILYLVFRPKLPKYSINEIGVTRFDLSNNDSLSVTFNLTITARNPNKRIGIDYRGGSHISAYYNGTKLCDGSLPKFYQGHHNTTVLNIPLSGEAENATALENSLTQQLQQSGSVPLRLKAKQPVRIKFGKLKIFKITFRVRCWIVVDNLNANNSIRIKSSSCKFRLKL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1042 257 MobiDBLite consensus disorder prediction 14 29 - -
Ahy7g1042 257 MobiDBLite consensus disorder prediction 1 62 - -
Ahy7g1042 257 Gene3D - 95 235 - -
Ahy7g1042 257 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 45 255 - -
Ahy7g1042 257 Pfam Late embryogenesis abundant protein 128 231 IPR004864 -
Ahy7g1042 257 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 45 255 - -
Ahy7g1042 257 SUPERFAMILY LEA14-like 98 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1042 Ahy-Chr7 15655304 15656447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1042 51 257 EF-hand Containing Proteins AT5G21130 30.660 9.16e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1042 - - gmx:100778798 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1273 17 19781778 19783047 Ahy7g1042 7 15655304 15656447 hybridization
Ahy17g1273 17 19781778 19783047 Ahy7g1042 7 15655304 15656447 PCT
Ahy7g1042 7 15655304 15656447 Ahy17g1273 17 19781778 19783047 PCT
Ahy7g1042 7 15655304 15656447 Ahy7g1042 7 15655304 15656447 PCT