Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0229 ATGTTCGTCTACAAGGTTCTATACCGTGTTTCCAGAACCATTTCTCGAAGCTCCACGCTTCTCTCTGCTTCGCAAAGGCACCCCCAACACTTTTCAACCTTCTCCAATCACTTCCATTCCCTCCTTCCCCAATCGCAAACCAAGGTTCAAGCCAATTTGTTATATCCACCAATAAATCCTTCTCTGGCTCCAATATTTGGATTTTCTTCATCAGCATCACCTGACGAAAAGGAAAAGGCAAATAATGTGGGAGATTCTACAAATGATGACCCTGCCAAAACAAGTGTGGATGAGAAGGAAATTGATCAGGGTGAACAAGCCAAAGGTGCTGATCAAAGAGAAGAATCAGATTCTGATATAGAGAGTGAAGATCTATCAAGGGATGATTTAATTAAGCTTGTTGCTGAGAAGGAAGAACTTTTGAATTTGAAGCACAAAGAGATTGAGAAAATGCAGGATAAAGTTCTGCGTACTTATGCAGAGATGGAGAATGTCATGGACAGAACTAGACGTGAATCAGAGAATTCAAAAAAATTTGCCATACAGAATTTCGCAAAGAGCTTACTAGATGTTGCGGACAACTTGGGAAGAGCTTCCTCTGTTGTAAAGGAAAGCTTTTCAAAGATTGATGCATCAAATGAAACCTCCGAATCCGTAAAACTCTTGAAAACACTTTTGGAAGGTGTTGAAATGACAGACAAGCAACTTTCAGAGGTACTTAAAAAGTTTGGTGTTGAAAAGTTCGATCCTACAAATGAGCCCTTTGATCCGAATATGCACAATGCCATCTTCCAAGTTCCTGACAGCTCCAAGCCTCCAGGCACCGTTGCTGCTGTTCTCAAGGCAGGATATAAGCTTTATGATCGCGTTATTCGCCCGGCCGAAGTTGGTGTAACCCAAGGTGTGGAGGAGGATAAGAATGCAACTGAATGA 933 0.418 MFVYKVLYRVSRTISRSSTLLSASQRHPQHFSTFSNHFHSLLPQSQTKVQANLLYPPINPSLAPIFGFSSSASPDEKEKANNVGDSTNDDPAKTSVDEKEIDQGEQAKGADQREESDSDIESEDLSRDDLIKLVAEKEELLNLKHKEIEKMQDKVLRTYAEMENVMDRTRRESENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIDASNETSESVKLLKTLLEGVEMTDKQLSEVLKKFGVEKFDPTNEPFDPNMHNAIFQVPDSSKPPGTVAAVLKAGYKLYDRVIRPAEVGVTQGVEEDKNATE* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0229 310 Gene3D - 132 243 IPR013805 -
Ahy7g0229 310 Pfam GrpE 134 299 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 Coils Coil 134 154 - -
Ahy7g0229 310 Hamap Protein GrpE [grpE]. 97 300 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 ProSitePatterns grpE protein signature. 255 298 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 PRINTS GrpE protein signature 252 267 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 PRINTS GrpE protein signature 279 298 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 PRINTS GrpE protein signature 156 172 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 PANTHER GRPE PROTEIN HOMOLOG 1 300 - -
Ahy7g0229 310 MobiDBLite consensus disorder prediction 69 124 - -
Ahy7g0229 310 CDD GrpE 149 298 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 245 300 IPR009012 GO:0006457
Ahy7g0229 310 MobiDBLite consensus disorder prediction 91 115 - -
Ahy7g0229 310 Gene3D Head domain of nucleotide exchange factor GrpE 244 299 IPR009012 GO:0006457
Ahy7g0229 310 PANTHER GRPE PROTEIN 1 300 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Ahy7g0229 310 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 136 244 IPR013805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0229 Ahy-Chr7 1766524 1769523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0229 K03687 - gmx:100803396 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0340 17 3106212 3109198 Ahy7g0229 7 1766524 1769523 hybridization