Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0228 ATGGAGCTCTGTTCTCGAACCTTAACAACTCTTCTTCATCGCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACTCTCTTCTTCGTGCAACTACTTGTAACTATGCAACACCTTCCAAATCCAGCAACTACTTCAACCTCTCATCATCATCGTCATCTCATTATCATAATCATCATGTTCTTCACCACTTCCAACAACCACCCTTTCTCTTTCACCATCATCACGGTAGTTTTTCTTCCTTCATTGTTTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGTGGCTGCTTCTTCCACAGAAGAGAAAATGGACCGTCTTCCGGCAGAGTTGAACGTCACCGAAACACAAGAACCCAATTCCAGAGTTAGACTTCAAGTGGAGGTGCCACCAGTTGTCTGTGAGGATTGTTACAAAAGGGTCATATCTGAGTTTACAAAGCAAGCAAAGGTCCCCGGATTCCGCCCCGGAAAGCCGGTTCCAGAAAGTATTCTTGTCGGTTACGTCGGGCGCAAAAATGTTCAGAAGGCCACAATCGAATCTATATTGAGGAGAACACTTCCACATGCTATGACTTCAGTTACCAGAAAGGCTTTGCCGGACTCTGTGCGTATAGTGACTAAGTTTTCTGAGTTGGAGAAAACATATTCTTCTCAAGGGAGTCTTAGATATGATGTCCTTGCTGATATTGTACCTGAAATCAAATGGGTTCCTGATAATGGATACAAGAATCTGAAAATTGTTGTTGAAATAGACAGTGATATTGATGCTCAGAAAGCATCTGAACAAGAATTCAAAAGGCGTCACAAATCCATTGGTGCGCTGAAGGTTGTTGCTGACAGAGGACTACAGGTTGGTGATGTTGTTGTCATTGACATCTCAGCAACAACCATTGACCAAGATGAATCAAAGATTAAAAATATTCCTTCTGCTGAAAGTAAAGGATTTAACTTCGATACAGAAGATGGTTACAGAATATTGCCCGGTTTCCTTGATTCTATAATTGGAATTCGTCCTGGTGAAACAAAGTCATTTCCTCTTGTGTTTCCTGAAACATGGAATCAAGAAAATCTCCGTGGTGTTCATGCTCAGTTTACTGTTGAATGCAAAGAACTATTTTACAGAGATTTGCCGGAACTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGCACCACAGTGCAACAGGTCAGAGACCTATTGTTGCAGAGATGTCAAGAGGTGGAGCAATCAGCTAGAGAACAAGCAACTGATAATGCTATATTAGATCAGATTTCCAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGACAGCTATATGGAGCCAGCCTTTTAGAAATACAGGCGAAAATGAATCTAAATGACCAGCAATTGGCTTCTCTGTCAAGTCAAAAGGCTGTGAATGAATATCTTGAGCATCAGAAGGACAATATAAGAAATTTGATAAAACAGAATCTGGCCGTCGGTGATATATATAGGCGCGAAAATCTGCAGTTCTCCACTGAGGACCTTGTCAAGGAGGTTGAGAATTCCATCACCGAATTCAAACGTCAAAATCAAGAATATGACGAGGAAAGGGTAAAGGATCAGGTCCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAGTATGTAACCAGATGA 1701 0.4109 MELCSRTLTTLLHRTSSSSSSSSSHSLLRATTCNYATPSKSSNYFNLSSSSSSHYHNHHVLHHFQQPPFLFHHHHGSFSSFIVSASSSSSSSSSSSSSVAASSTEEKMDRLPAELNVTETQEPNSRVRLQVEVPPVVCEDCYKRVISEFTKQAKVPGFRPGKPVPESILVGYVGRKNVQKATIESILRRTLPHAMTSVTRKALPDSVRIVTKFSELEKTYSSQGSLRYDVLADIVPEIKWVPDNGYKNLKIVVEIDSDIDAQKASEQEFKRRHKSIGALKVVADRGLQVGDVVVIDISATTIDQDESKIKNIPSAESKGFNFDTEDGYRILPGFLDSIIGIRPGETKSFPLVFPETWNQENLRGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVRDLLLQRCQEVEQSAREQATDNAILDQISKMVEVDIPQSLFEEQGRQLYGASLLEIQAKMNLNDQQLASLSSQKAVNEYLEHQKDNIRNLIKQNLAVGDIYRRENLQFSTEDLVKEVENSITEFKRQNQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYVTR* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0228 566 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 105 565 - -
Ahy7g0228 566 Coils Coil 516 536 - -
Ahy7g0228 566 Gene3D - 245 561 IPR037041 GO:0006457|GO:0015031
Ahy7g0228 566 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 105 565 IPR005215 GO:0015031
Ahy7g0228 566 Pfam Bacterial trigger factor protein (TF) C-terminus 398 555 IPR008880 GO:0006457|GO:0015031
Ahy7g0228 566 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 384 564 IPR027304 -
Ahy7g0228 566 MobiDBLite consensus disorder prediction 89 104 - -
Ahy7g0228 566 Gene3D - 113 238 IPR036611 GO:0006457|GO:0015031
Ahy7g0228 566 MobiDBLite consensus disorder prediction 89 109 - -
Ahy7g0228 566 Hamap Trigger factor [tig]. 115 562 IPR005215 GO:0015031
Ahy7g0228 566 SUPERFAMILY Trigger factor ribosome-binding domain 115 253 IPR036611 GO:0006457|GO:0015031
Ahy7g0228 566 Pfam Bacterial trigger factor protein (TF) 116 255 IPR008881 GO:0006457|GO:0015031
Ahy7g0228 566 TIGRFAM tig: trigger factor 126 555 IPR005215 GO:0015031
Ahy7g0228 566 Gene3D - 275 382 IPR046357 GO:0003755
Ahy7g0228 566 SUPERFAMILY FKBP-like 281 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0228 Ahy-Chr7 1758212 1765001 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0228 K03545 - gmx:100812597 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0339 17 3097882 3104778 Ahy7g0228 7 1758212 1765001 hybridization