Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0339 ATGGAGCTCTGTTCTCGAACCTTAACAACTCTTCTTCATCGCACTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAACTCTCTTCTTCGTGCAACTACTTGTAACTATGCAACACCTTCCAAATCCAGCAACTACTTCAACCTCTCATCATCTCATTATCATAATCATCATGTTCTTCACCACTTCCAACAACAACCCTTTCTCTTTCACCATTATCACGGTAGTTTTTCTCCCTTCACTGTTTCAGCTTCTTCTTCTTCGGCGGCTGCTTCTTCCACAGAAGAGAAAATGGACCGTCTTCCGGCAGAGTTGAACGTCACCGAAACACAAGAACCCAATTCCAGAGTTAGACTTCAAGTGGAGGTGCCACCAGTTGTCTGTGAGGATTGTTACAAAAGGGTCATATCTGAGTTTACAAAGCAAGCAAAGGTCCCCGGATTCCGCCCCGGAAAGCCGGTTCCAGAAAGTATTCTTGTCGGTTACGTCGGGCGCAAAAATGTTCAGAAGGCCACAATCGAATCTATATTGAGGAGAACACTTCCACATGCTATGACTTCAGTTACCAGAAAGGCTTTGCCGGACTCTGTGCGTATAGTGACTAAATTTTCTGAGTTGGAGAAAACATATTCTTCTCAAGGGAGTCTTAGATATGATGTCCTTGCTGATATTGTACCTGAAATCAAATGGGTTCCTGATAATGGATACAAGAATCTGAAAATTGTTGTTGAAATAGACAGTGATATTGATGCTCAGAAAGCATCTGAACAAGAATTCAAAAGGCGTCACAAATCCATTGGTGCGCTGAAGGTTGTTGCTGACAGAGGACTACAGGCTGGTGATGTTGTTGTCATTGACATCTCAGCAACAACCATTGATCAAGATGAATCAAAGATTAAAAATATTCCTTCTGCTGAAAGTAAAGGATTTAACTTCGATACAGAAGATGGTTACAGAATATTGCCCGGTTTCCTTGATTCTATAATTGGAATTCGTCCGGGTGAAACAAAGTCATTTCCTCTTGTGTTTCCTGAAACATGGAATCAAGAAAATCTCCGTGGTGTTCATGCTCAGTTTACTGTTGAATGCAAAGAACTATTTTACAGAGATTTGCCGGAACTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGCACGACAGTGCAACAGGTCAAAGACCTATTGTTGCAGAGATGTCAAGAGGTGGAGCAATCAGCTAGAGAACAAGCAACTGATAATGCTATATTAGATCAGATTTCCAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGGCAGCTATATGGAGCCAGCCTTTTAGAAATACAGGCGAAGATGAATCTAAATGACCAGCAATTGGCTTCTCTGTCAAGTCAAAAGGCTGTGAATGAATATCTTGAGCATCAGAAGGACAATATAAGAAATTTGATAAAACAGAATCTGGCCGTTGGTGATATATATAGGCGCGAAAATCTGCAGTTCTCCACTGAGGACCTTGTCAAGGAGGTTGAGAATTCCATCACCGAATTCAAACGTCAAAATCAAGAATATGATGAGGAAAGGGTAAAGGATCAGGTCCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAGTATGTAACCAGATGA 1671 0.4123 MELCSRTLTTLLHRTSPSSSSSSSSSNSLLRATTCNYATPSKSSNYFNLSSSHYHNHHVLHHFQQQPFLFHHYHGSFSPFTVSASSSSAAASSTEEKMDRLPAELNVTETQEPNSRVRLQVEVPPVVCEDCYKRVISEFTKQAKVPGFRPGKPVPESILVGYVGRKNVQKATIESILRRTLPHAMTSVTRKALPDSVRIVTKFSELEKTYSSQGSLRYDVLADIVPEIKWVPDNGYKNLKIVVEIDSDIDAQKASEQEFKRRHKSIGALKVVADRGLQAGDVVVIDISATTIDQDESKIKNIPSAESKGFNFDTEDGYRILPGFLDSIIGIRPGETKSFPLVFPETWNQENLRGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVKDLLLQRCQEVEQSAREQATDNAILDQISKMVEVDIPQSLFEEQGRQLYGASLLEIQAKMNLNDQQLASLSSQKAVNEYLEHQKDNIRNLIKQNLAVGDIYRRENLQFSTEDLVKEVENSITEFKRQNQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYVTR* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0339 556 SUPERFAMILY Trigger factor ribosome-binding domain 105 243 IPR036611 GO:0006457|GO:0015031
Ahy17g0339 556 Hamap Trigger factor [tig]. 105 552 IPR005215 GO:0015031
Ahy17g0339 556 Pfam Bacterial trigger factor protein (TF) C-terminus 388 545 IPR008880 GO:0006457|GO:0015031
Ahy17g0339 556 Gene3D - 265 372 IPR046357 GO:0003755
Ahy17g0339 556 Gene3D - 103 228 IPR036611 GO:0006457|GO:0015031
Ahy17g0339 556 Coils Coil 506 526 - -
Ahy17g0339 556 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 93 555 IPR005215 GO:0015031
Ahy17g0339 556 Gene3D - 235 551 IPR037041 GO:0006457|GO:0015031
Ahy17g0339 556 SUPERFAMILY FKBP-like 271 375 - -
Ahy17g0339 556 Pfam Bacterial trigger factor protein (TF) 106 245 IPR008881 GO:0006457|GO:0015031
Ahy17g0339 556 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 374 554 IPR027304 -
Ahy17g0339 556 TIGRFAM tig: trigger factor 116 545 IPR005215 GO:0015031
Ahy17g0339 556 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 93 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0339 Ahy-Chr17 3097882 3104778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0339 K03545 - gmx:100812597 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0339 17 3097882 3104778 Ahy17g0339 17 3097882 3104778 ECH
Ahy17g0339 17 3097882 3104778 Ahy7g0228 7 1758212 1765001 hybridization