Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2619 ATGCCATTCATGGCTGTGGTTGAAGTATTCATGATTGCTGTGGCTAATTGTTTCAACTATCAATCAAGATGCATTGGTAAAAATCAGAAACCTTACTACAATTATGAGGATCTCGCTCGCCTTGCTCAAGGAACCAGATTTACTGTTAATGAAGTGGAGGCATTGTATGTGCTGTTTAAGAGGTTAAGTAGCTCCATAATTGATGATGGTTTGATTCACAAGGAGGAACTTCAATTGGCTCTATTCCAAACTCCTAATGGAGAAAATTTTTTCCTAGATCGAGTATTTGACCTTTTTGACGAGAAAAGCAAGGGTGTTATCGACTTTGACGAATTTGTCCACACGCTCAGTATTTTCCATCCTTATGCTCCTCTAGAAGAAAAAATTGATTATGCATTTAAGCTTTATGATATACGAAAAACTGGATTTATCGAGCGAGAAGAACTCAAGCAAATGGTGAAAGCCATGTTGATGGAATCTGACATGAACCTTTCGGACGATCTTCTTGAAGCTATTGTTGACAAGACAATTGCTGATGCCGATAAGGATAAGGATGGTAAAATCAGTAAAGAAGATTGGAAAGTTTTTGTGAGTAGAAATCCATCCATATTGAAGAACATGACACTTGCTTATTTGAAGGACATCGCATGTATATTTCCAAGTTTTATTTTCAAATCAGATTTAGATGAGTTAGTGAAGACTAAGGAGTTACAAGACATTGTGGTCCTTGAGCTGCTCAAGTTGCTTGGCTTTCAAGAAGGAAAGGTGGTGGACGACAACTACTTTGATCTTGTTTTCCTTCACGTGGGAGCTGGTGAGAAAGTTGATAGTAATGACCAAAAGGAGATTGATACTGAAATGGAGTATGTCAATGGCTTGGTTGGGGAGATAATGAGCCAAGCGCAACCAGGATCGGACGTTGGTTCTAGGCTACACTTGTCTGTTGTCATGAGCTATGGGAATGTCTTGGAGGGTGATGACTCCAAGTATTCGGTGTCAAAGAGGGCAGATGAGAAGAACTCTTATCTTTCAGAGCTCTTTCCTTTGCAAAGTTATACTATGAAAGGAGGAAGCCCTCGAAAGGATGTAAGGCACCATTGTCCCATGTTGATTGCTCAGTGGCAACATGCTGTGACTCGCAAGGATGAAACACAGAAGTTTTCTTTCGAAGATTTCAAGGAGCATTGTGGGAATCTTACAATACCAGCAGACAGGTTCTTGCATGAGATAGCCTTTAAGCTTTGGAAAGCTCCGAAGTATGGAGCCTAA 1269 0.4019 MPFMAVVEVFMIAVANCFNYQSRCIGKNQKPYYNYEDLARLAQGTRFTVNEVEALYVLFKRLSSSIIDDGLIHKEELQLALFQTPNGENFFLDRVFDLFDEKSKGVIDFDEFVHTLSIFHPYAPLEEKIDYAFKLYDIRKTGFIEREELKQMVKAMLMESDMNLSDDLLEAIVDKTIADADKDKDGKISKEDWKVFVSRNPSILKNMTLAYLKDIACIFPSFIFKSDLDELVKTKELQDIVVLELLKLLGFQEGKVVDDNYFDLVFLHVGAGEKVDSNDQKEIDTEMEYVNGLVGEIMSQAQPGSDVGSRLHLSVVMSYGNVLEGDDSKYSVSKRADEKNSYLSELFPLQSYTMKGGSPRKDVRHHCPMLIAQWQHAVTRKDETQKFSFEDFKEHCGNLTIPADRFLHEIAFKLWKAPKYGA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2619 422 PANTHER CALCINEURIN B-LIKE PROTEIN 10 1 228 - -
Ahy6g2619 422 SUPERFAMILY EF-hand 38 222 IPR011992 -
Ahy6g2619 422 CDD EFh 92 154 IPR002048 GO:0005509
Ahy6g2619 422 CDD EFh 128 198 IPR002048 GO:0005509
Ahy6g2619 422 SMART efh_1 172 200 IPR002048 GO:0005509
Ahy6g2619 422 SMART efh_1 128 156 IPR002048 GO:0005509
Ahy6g2619 422 SMART efh_1 91 119 IPR002048 GO:0005509
Ahy6g2619 422 ProSiteProfiles EF-hand calcium-binding domain profile. 168 203 IPR002048 GO:0005509
Ahy6g2619 422 Pfam EF-hand domain pair 126 192 IPR002048 GO:0005509
Ahy6g2619 422 PRINTS Recoverin family signature 142 160 - -
Ahy6g2619 422 PRINTS Recoverin family signature 33 47 - -
Ahy6g2619 422 PRINTS Recoverin family signature 95 116 - -
Ahy6g2619 422 PRINTS Recoverin family signature 188 208 - -
Ahy6g2619 422 PANTHER CALCINEURIN B 1 228 IPR045198 GO:0005509|GO:0019722|GO:0019900
Ahy6g2619 422 ProSiteProfiles EF-hand calcium-binding domain profile. 87 122 IPR002048 GO:0005509
Ahy6g2619 422 ProSitePatterns EF-hand calcium-binding domain. 181 193 IPR018247 -
Ahy6g2619 422 ProSiteProfiles EF-hand calcium-binding domain profile. 124 159 IPR002048 GO:0005509
Ahy6g2619 422 Gene3D - 37 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2619 Ahy-Chr6 111448696 111457304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2619 44 240 EF-hand Containing Proteins AT5G24270 60.914 2.65e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2619 K06268 - nnu:104586607 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3328 16 150232827 150239248 Ahy6g2619 6 111448696 111457304 hybridization