Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2398 ATGAGACGCACTCCTTCGCCGAACCATCTGCTCGCCGCCGCCGTTGCCGCCGCCGACGCCACCTCAACAGCTGGCACTACAACCACCTTAATTATGTCTTCGTGCCACCATTACCGAGGACGTGGGAGAGGATTCTCCGGGCGCTCCTACTCCAGTGGGAGAGGACAGAACGTTACTGGCGACGATCACTTCCGGTCAGTACGCGACACCAATTTGGGACTCCGGCGAGGGGAGAGAGGAAGATTCTCGAACCAAACACCATCGCCGCAGCAGCAGCAGCAGCAGTATCAGAATCAGTCTTATCATAGGGTTCCTCCGCCGCCGCAGCTTCAGAATCAGTCTTATAATAGGGCTCCTCCGCCGCCTCAGCTTCAGTATCAGTCTTATAATAGGGCTCCTCTTTCGCCTCAGCTTCAAAACTGTCAATTTCGCCACGCTGCGCCGCAGTTTCGGCCACCGCCTCCGCAGTATGATCACCGCAGGCCAGCGTTTCGTCCGCTGCAGAATCTCCGCCCACGGCCCCCGGACTATCGAGAGTGGGAACTTGCAACGGCGCCGCCGCCTCCTCCTCATTGTGAACGGTTTATAATTGTGTCCTATAATATATTGGCTGACTACCTTGCTTTGGACCACCGGAGTAAACTTTACTTCCACATACCACGACACATATTGGACTGGCAGTGGAGAAAGAAGAATCTAATTTTTGAGCTTGGTTTGTGGTCAGCTGATATCATGTGTTTACAGGAGGTTGACAGATTTGATGAGTTGGCCGAGGAGTTGAAGCTCAAGGGCTACAGTGGCTGCTGGAAGATGCGTACAGGCAATCCAGTTGATGGATGTGCAATCTTTTGGCGAACATCAAGGTTCAATTTGTTATATGAAGAATGCATTGAGTTTAATAAGCTGGGACTTAGAGATAATGTTGCACAGATATGTGTGCTAGAGTTCAAAACTCAAAATGGATCTGTCCCGTCAAGCACGAAAGGTTCAAGTAAAGTTGTGGTTTGTAACACTCATGTGCTTTATAATCCTAATAGAGGAGAAATTAAGCTTGGCCAGGTTAGAGTGCTAATTGATAGGGCTAAAGCTGTTTCTGAACTCTGGAATAATGCTCCTGTTGTTATCTGTGGCGATTTTAATTGCACCCCTAAGAGTCCTTTGTACAACTTTATCTCAGAACAGAAGTTAGATTTGTCTGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCTGTAATTTGTGCATCAAGATTTTATGGTCCTAATTCAAGATCTGCTAATGGTTCAGTTCAGACCACATCTAATGTGGGTGATGAGGAAGTTAATATTGAACAAAATAATTCTTTGTCAGACATGCAGAATCCAGATTCCAAGAGTAACAGTTCAGAGAATCAATTTTCTGACACTATTTCGAATATGCCTGATAAGTCTCTGACAAATGTGCAGCATGATAAGGAGAGTGATGCATATGCAATAAGGGATGTACAGGATACTGCCGTTGATCATTGCAAGACTTTTGGTGAAATTGAAAACATTGAAGAGTCAAATCCTACTTATAGTGAAGAACATGTATTGGATACTGTCCAAAGTTTAAATCAAGGAGCATCAAGTGAACATGTATCAGATGCCGTCACTACTTCAAAGCAAGAATCATCAAGCAAAATTTCCAGCTTACATTTTCCTGAAGGAAATGGAAAATTGGAGTCTGAATGCTCCTCGACGTCTCTCCAGGAAGATGATCATTCTTCCAGGGTCAATATAGATCTTGAGTCGTCAAATATTCTCAATGAAGAAATTTGTTCAACTCCACTATCCAGCCAGAATTCAGTTTCTGATTCTTTTGAAGAACCTGATACTGGGTGTGGAGAAAGACTGTCTGATGAGCTTCTCACCAATGACAAATTGAACAGCTCATCAACCTCTGTAGTAGTAGATAAATCACATCAATCCGCCAACATTGACTTTCCACTAGAAGAAAAACTAGAGAAATTGTTCTTTGATGAGGTAGATAAAACCATAGGCAATGAAAATATGGAAGATGACACGGCATTCATATCATCCTTTTATAACACTGAAGAAGGTGCGAGTCTTGATCGTGGTCCATCAATGAAATCAAATATTGAAAAATCATATAAGTTTGAGGAATCAGAATCTGCTTCCAACTTGCTGCTTGCAGAAAGCAATGAAGTGGATGGTGACTTGTCTTCAACCTCAGCTTCTGAATATGTTAATGCTGAGAGAACCACTTATAACCCCTCATTTTGGACCCCAATGGACATAGAGACAGCAACAGGAAATTCAGAGTGCACATTCCTGGAGCATCCTTTACCACTCAGGAGCACATATACTGAAGCTATGGATTCTTCAGGGACCAGAGACCCCCATGGAGAGCCGCTGGTGACCAGTTATAATAGATGCTTTTTGGGCACTGTTGACTACATTTGGCGGTCCGAAGGTTTGCAGACAACCAGAGTTCTCGCTCCAATACCTAAACATGCCATGGAATGGACTCCTGGATTTCCAACAAAGAAATGGGGTAGTGATCACATTGCCTTGGCTTCAGAATTGGCAATCTTAAAAGATGGTACCCAAGTCCGCAATGATGTTTAA 2613 0.4413 MRRTPSPNHLLAAAVAAADATSTAGTTTTLIMSSCHHYRGRGRGFSGRSYSSGRGQNVTGDDHFRSVRDTNLGLRRGERGRFSNQTPSPQQQQQQYQNQSYHRVPPPPQLQNQSYNRAPPPPQLQYQSYNRAPLSPQLQNCQFRHAAPQFRPPPPQYDHRRPAFRPLQNLRPRPPDYREWELATAPPPPPHCERFIIVSYNILADYLALDHRSKLYFHIPRHILDWQWRKKNLIFELGLWSADIMCLQEVDRFDELAEELKLKGYSGCWKMRTGNPVDGCAIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLEFKTQNGSVPSSTKGSSKVVVCNTHVLYNPNRGEIKLGQVRVLIDRAKAVSELWNNAPVVICGDFNCTPKSPLYNFISEQKLDLSGIDRNKVSGQASAVICASRFYGPNSRSANGSVQTTSNVGDEEVNIEQNNSLSDMQNPDSKSNSSENQFSDTISNMPDKSLTNVQHDKESDAYAIRDVQDTAVDHCKTFGEIENIEESNPTYSEEHVLDTVQSLNQGASSEHVSDAVTTSKQESSSKISSLHFPEGNGKLESECSSTSLQEDDHSSRVNIDLESSNILNEEICSTPLSSQNSVSDSFEEPDTGCGERLSDELLTNDKLNSSSTSVVVDKSHQSANIDFPLEEKLEKLFFDEVDKTIGNENMEDDTAFISSFYNTEEGASLDRGPSMKSNIEKSYKFEESESASNLLLAESNEVDGDLSSTSASEYVNAERTTYNPSFWTPMDIETATGNSECTFLEHPLPLRSTYTEAMDSSGTRDPHGEPLVTSYNRCFLGTVDYIWRSEGLQTTRVLAPIPKHAMEWTPGFPTKKWGSDHIALASELAILKDGTQVRNDV* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2398 870 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 44 860 - -
Ahy6g2398 870 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 44 860 - -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 447 479 - -
Ahy6g2398 870 Gene3D Endonuclease/exonuclease/phosphatase 168 488 IPR036691 -
Ahy6g2398 870 Gene3D Endonuclease/exonuclease/phosphatase 705 869 IPR036691 -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 38 125 - -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 61 76 - -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 81 125 - -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 605 626 - -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 535 560 - -
Ahy6g2398 870 Pfam Endonuclease/Exonuclease/phosphatase family 199 399 IPR005135 GO:0003824
Ahy6g2398 870 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 535 585 - -
Ahy6g2398 870 MobiDBLite consensus disorder prediction 447 482 - -
Ahy6g2398 870 SUPERFAMILY DNase I-like 185 397 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2398 Ahy-Chr6 108206624 108214297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2398 258 394 EF-hand Containing Proteins AT1G02270 26.207 4.11e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2398 - - adu:107495335 1709.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3079 16 146434128 146441878 Ahy6g2398 6 108206624 108214297 hybridization