Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3079 ATGAGACGCACTCCTTCGCCGAACCATCTGCTCGCCGCCGCCGTTGCCGCCGCCGACGCCACCTCAACAGCTGCCCTCACTACCACCTTAATTATGTCTTCGTGCCACCATTACCGAGGACGTGGGAGAGGATTCTCCGGGCGCTCCTACTCCAGTGGGAGAGGACAGAACGTTACTGGCGACGATCACTTCCGGTCAGTACGCGACACCAATTTGGGAATCCGGCGAGGAGAGAGAGGAAGATTCTCGAACCAAACACCATCGCAGCAGCAGCAGCAGTATCAGAATCAGTCTTATCATAGGGTTCCTCCGCCGCCGCAGCTTCAGAATCAGTCTTATAATAGGGTTCCTCCGCCGCCTCAGCTTCAGTATCAGTCTTATAATAGGGCTCCTTCGCCGCCTCAGCTTCAAAACTGTCAATTTCGCCACCCTGCGCCGCAGTTTCGGCCACCGCCTCCGCAGTATGATCACCGCAGGCCAGCGTTTCGTCCGCTGCAGAATCTCCGCCCACGGCCCCCGGACTATCGAGAGTGGGAACTTGCAACAGCGCCGTCGCCTCCTCCTCATTGTGAACGGTTTATAATTGTGTCCTATAATATATTGGCTGACTACCTTGCTTTGGACCACCGGAGTAAACTTTACTTCCACATACCACGACACATATTGGACTGGCAGTGGAGAAAGAAGAATCTAATTTTTGAGCTTGGTTTGTGGTCAGCTGATATCATGTGTTTACAGGAGGTTGACAGATTTAATGAGTTGGCCGAGGAATTGAAGCTCAAGGGCTACAGTGGCTGCTGGAAGATGCGTACAGGCAATCCAGTTGATGGATGTGCAATCTTTTGGCGAACATCAAGGTTCAATTTGTTATATGAAGAATGCATTGAGTTTAATAAGCTGGGACTTAGAGATAATGTTGCACAGATATGTGTACTAGAGTTCAAAACTCAAAATGGATCTGTCCCGTCAAGCACGAAAGGTTCAAGTAAAGTTGTGGTTTGTAACATTCATGTGCTTTATAATCCTAATAGAGGAGAAATTAAGCTTGGCCAGGTCAGAGTGCTAATTGATAGGGCTAAAGCTGTTTCTGAACTCTGGAATAATGCTCCTGTTGTTATCTGTGGCGATTTTAATTGCACCCCTAAGAGTCCTTTGTACAACTATATCTCAGAACAGAAGTTAGATTTGTCTGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCTGTAATTTGTGCATCAAGATTTTATGGTCCTAATTCAAGATCTGCTAATGGTTCAGTTCAGACCGCATCTAATGGGGGTGACAAGGAAGTTAATATTGAACAAAATAATTCTTTGTCAGACATGCAGAATCCAGATTCCAAGAGTAACAGTTCAGAGAATCAATTTTCTGACACTATTTCGCATATGCCTGATAAGTCTCTGACAAATGTGCAGCATGATAAGGAGAGTGATGCATATGCAAGAAGGGATGTACAGGATACTGCTGTTGATCATTGCAAGACTTTTGGTGAAATTGAAAACATTGAAGAGTCAAATCCTACTTATAGTGAAGAACATGTATTGGATACTGTCCCAAGTTTAAATCAAGGAGCATCAAGTGAACATGTATCAGATGCCGTCACTACTTCAAAGCAAGAATCATCAAGCAAAATTTCCAGCTTACATTTTCCTGAAGGAAATGGAAAATTGGAGTCTGAATGCTCCTCGACGTCTCTCCAGGAAGATGATCATTCTTCCAGGGTCAATATAGATCTTGAGTCGACAAATATTCTCAATGAAGAAATTTGTTCAACTCCACTATCCAGCCAGAATCCAGTTTCTGATTCTTTTGAAGAACCTGATACTGGGTGCGGAGAAAGACCATCTGATGAGCTTCTCACCAATGACAAATTGAACAGCTCATCAACCTCTGTAGTAGTAGATAAATCACATCAATCCGCCAACATTGACTTTCCACTAGAAGAAAAACTAGAGAAATTGTTCTTTGATGAGGTAGATAAAACCATAGGCAATGAAAATATGGAAGATGACACGGCATTCATATCATCCTTTTATAACACTGAAGAAGGTGTGAGTCTTGATCTTGGTCCATCAATGAAATCAAATATTGAAAAATCATATGAGTTTGAGGAATCAGAATCTGCTTCCAACTTGCTGCTTGCAGAAAGCAATGAAGTGGATGGTGACTTGTCTTCAAGCTCAGCTTCTGAATATGTTAATGCTGAGAGAACCACTTACAACCCCTCATTTTGGACCCCAATGGACATAGAGACAGCAACAGGAAATTCAGAGTGCACATTCCTAGAGCATCCTTTACCACTCAGGAGCACATATACTGAAGCTATGGATTCTTCAGGGACCAGAGACCCCCATGGAGAGCCCCTGGTGACCAGTTATAATAGATGCTTTTTGGGCACTGTTGACTACATTTGGCGGTCCGAAGGTTTGCAGACAACCAGAGTTCTCGCTCCAATACCTAAACATGCCATGGAATGGACTCCTGGATTTCCAACAAAGAAATGGGGTAGTGATCACATTGCCTTGGCTTCAGAATTGGCAATCTTAAAAGATGGTACCCAAGTCCGCAATGATGTTTAA 2607 0.4404 MRRTPSPNHLLAAAVAAADATSTAALTTTLIMSSCHHYRGRGRGFSGRSYSSGRGQNVTGDDHFRSVRDTNLGIRRGERGRFSNQTPSQQQQQYQNQSYHRVPPPPQLQNQSYNRVPPPPQLQYQSYNRAPSPPQLQNCQFRHPAPQFRPPPPQYDHRRPAFRPLQNLRPRPPDYREWELATAPSPPPHCERFIIVSYNILADYLALDHRSKLYFHIPRHILDWQWRKKNLIFELGLWSADIMCLQEVDRFNELAEELKLKGYSGCWKMRTGNPVDGCAIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLEFKTQNGSVPSSTKGSSKVVVCNIHVLYNPNRGEIKLGQVRVLIDRAKAVSELWNNAPVVICGDFNCTPKSPLYNYISEQKLDLSGIDRNKVSGQASAVICASRFYGPNSRSANGSVQTASNGGDKEVNIEQNNSLSDMQNPDSKSNSSENQFSDTISHMPDKSLTNVQHDKESDAYARRDVQDTAVDHCKTFGEIENIEESNPTYSEEHVLDTVPSLNQGASSEHVSDAVTTSKQESSSKISSLHFPEGNGKLESECSSTSLQEDDHSSRVNIDLESTNILNEEICSTPLSSQNPVSDSFEEPDTGCGERPSDELLTNDKLNSSSTSVVVDKSHQSANIDFPLEEKLEKLFFDEVDKTIGNENMEDDTAFISSFYNTEEGVSLDLGPSMKSNIEKSYEFEESESASNLLLAESNEVDGDLSSSSASEYVNAERTTYNPSFWTPMDIETATGNSECTFLEHPLPLRSTYTEAMDSSGTRDPHGEPLVTSYNRCFLGTVDYIWRSEGLQTTRVLAPIPKHAMEWTPGFPTKKWGSDHIALASELAILKDGTQVRNDV* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3079 868 MobiDBLite consensus disorder prediction 447 476 - -
Ahy16g3079 868 MobiDBLite consensus disorder prediction 81 142 - -
Ahy16g3079 868 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 44 858 - -
Ahy16g3079 868 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 44 858 - -
Ahy16g3079 868 Pfam Endonuclease/Exonuclease/phosphatase family 197 397 IPR005135 GO:0003824
Ahy16g3079 868 MobiDBLite consensus disorder prediction 447 484 - -
Ahy16g3079 868 MobiDBLite consensus disorder prediction 61 76 - -
Ahy16g3079 868 MobiDBLite consensus disorder prediction 531 558 - -
Ahy16g3079 868 Gene3D Endonuclease/exonuclease/phosphatase 708 867 IPR036691 -
Ahy16g3079 868 Gene3D Endonuclease/exonuclease/phosphatase 166 492 IPR036691 -
Ahy16g3079 868 MobiDBLite consensus disorder prediction 601 632 - -
Ahy16g3079 868 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Ahy16g3079 868 MobiDBLite consensus disorder prediction 531 584 - -
Ahy16g3079 868 SUPERFAMILY DNase I-like 186 395 IPR036691 -
Ahy16g3079 868 MobiDBLite consensus disorder prediction 38 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3079 Ahy-Chr16 146434128 146441878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3079 - - adu:107495335 1646.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3079 16 146434128 146441878 Ahy6g2398 6 108206624 108214297 hybridization