Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1947 ATGGGTGCGAGTCGGAAGCTTCAGGGAGAGATCGATCGCGTTCTCAAGAAAGTCCAGGAAGGTGTTGAAGTCTTTGATAGTATCTGGAACAAGGTTTACGACACAGATAATGCCAACCAGAAGGAGAAGTTTGAAGCAGACCTCAAGAAGGAGATTAAGAAGCTTCAGAGGTACAGGGACCAAATTAAGACTTGGATTCAGTCCAGCGAAATCAAGGACAAGAAGGTTAGTGCATCTTATGAGCAAGCTCTAGTGGATGCCCGCAAGTTAATTGAACGTGAAATGGAAAGGTTTAAGATATGTGAAAAGGAGACAAAGACCAAAGCATTCTCTAAGGAAGGCTTAGGTCAACAGCCTAAGACTGATCCAAAAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGGGAGTTAGAATCTCAGATTGACAACTTTGAAGCTGAGCTTGAAGGGCTTTCTGTCAAGAAAGGAAAGAACAGGCCACCTAGATTGACGCATCTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGGCTATTAGACAATGATGAGTTAAGTCCGGAGCAGGTTAATGATGTCAAGGATTTCTTGGATGATTATGTAGAGCGTAATCAGGAGGACTTTGATGAATTCAGCGATGTTGATGAACTATACAGCTCATTGCCTTTAGATAAGGTGGAGACTCTTGAAGATCTTGTTACAATCCCCCCTGGCCTATCTAAGGCTACTCCTAGTCTCAGCTTGAAGAATACTTTGGCTGTTTCAGCATCACAATCAGCATCAGCATCTGCCTCACAAATATCTGAGCAAGCTGATGACACAGCATCCCAGGATAGCAATTCTGATATTGGTGCAAGAACTCCACCTGCGAAAGTTAGTGGAATTATTTCTGCTACTTCCACACCAGCTGGCAACCATGCTACTCCTCTTTCTGTGAATGTTTCTACGCATAATTTGTCCAGTGCACCAGCTGCTGGATCGGTCCTTTCTGGTTCGAATTCAGTTCGAAGTCCCATGGAGAATGCTAATGCTGCGAATTCACCTTCTGCGAATCAATCTTCCTCTTTGAAGGAAGAAGAGATTAATAGTTTCCCTGGCCAGAGACCATCCCCATCGCTTTCTGATGCAGCACTAAGGAGCATTAGCCGAAACAACCTTTCAAATCAAGCAGCAGCTAGCATCCCTCTTGGTGCTGGGAACATGGTTTCTAACAATGGAACCCTTGGGTCAGTCCCTTCAGCCTCTGAAATAACTAAGAGGAACATGTTGGCAGCTGATGATAGACTTGGTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCATTAAGTAATAGCAGATTGATCTTGCCTCAGGTTGGGAAGGCTAATGAAGCTGCCTCAGCTGACTCTAATGTCATTAATGAGGCTGCAGCTGTATCTAGTAGAGTTTTCTCCCCATCTGTGGTTCCTGGCATGCAATGGAGACCTGGAAGTCCATTCCAGAACCAAAGTGATGCGATTCGTCAAAGAACTGAAATAGCTCCAGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAGCAGCAGGGGCACAGCACCCTGCTTACTATGCCTTCTCTTGGAGGAAATCCTAAGCAGTTTTCTGCCCAGCAGCAAAATCCACTTTTGCAACAGTTTAACTCCCAAGGTTCCTCTGTTTCTTCTCAATCTGCTATTGGCCTTGGAGTCCAGTCACCAGGTTTTAGTGGTATTTCAACTACTACACTACAACAGCCACCCAATTCGGTCCATTCCCCATCTAGTCAACAGTCATTGATGTCAGATGTTGGCAATTCTAAAATTGAAGATCTACAACATCAGAATTTTCCTGATGATTCAGCTGTTGAATCTACTGGTAGTACTGGGGTTGGCAAGAGTCTCATAAGTGAAGATGATTTGAAATCAACATTTGCTGCAGATTCTCCAGCAGGGGTATCCGTCTCCCTTGCAGAAGCTGGTCAAACATCCAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAACCCAATCAACCTACTGGTAACCTTGGTGTCATTGGGAGAAGAAATGGCACGGATCTTGGAGCCATTGGTGATAGTTTCATGGGATCAAGTTCAAGTATTAATCCAAGTGGAGTGCGTGATCAATTATACAATTTGCAAATGCTTGAGGCAGCACACTACAAACTTCCTCTACCCAGAGACTCAGAACGTCCTAGAGCTTATACTCCTAGGCACCCAACGATAACACCTTCTAGTTATCCTCAGACACAGGCTCCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTAGGTCTTGAACCATTTGGCACTGATACATTGTTCTATGCATTTTATTATCAACAGAACACTTACCAGCAGTATTTGGCTGCAAAGGAACTAAAGAAACAGTCCTGGAGATACCACAAAAAGTATAACACATGGTTTCAGCGTCATGAAGAGCCCAAAGTTGCTACAGATGAATATGAGCAAGGAACATACGTATATTTCGATTTCCATATTGCAAATGATGACCTTCAACATGGGTGGTGTCAAAGAATCAAAACTGAATTCACTTTTGAATATAATTATCTTGAAGACGAGCTTCTTGTATAG 2658 0.4334 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVETLEDLVTIPPGLSKATPSLSLKNTLAVSASQSASASASQISEQADDTASQDSNSDIGARTPPAKVSGIISATSTPAGNHATPLSVNVSTHNLSSAPAAGSVLSGSNSVRSPMENANAANSPSANQSSSLKEEEINSFPGQRPSPSLSDAALRSISRNNLSNQAAASIPLGAGNMVSNNGTLGSVPSASEITKRNMLAADDRLGGSSGMVQPLVSPLSNSRLILPQVGKANEAASADSNVINEAAAVSSRVFSPSVVPGMQWRPGSPFQNQSDAIRQRTEIAPDQREKFLQKYQQVQQQGHSTLLTMPSLGGNPKQFSAQQQNPLLQQFNSQGSSVSSQSAIGLGVQSPGFSGISTTTLQQPPNSVHSPSSQQSLMSDVGNSKIEDLQHQNFPDDSAVESTGSTGVGKSLISEDDLKSTFAADSPAGVSVSLAEAGQTSRDIDLSPGQPLQPNQPTGNLGVIGRRNGTDLGAIGDSFMGSSSSINPSGVRDQLYNLQMLEAAHYKLPLPRDSERPRAYTPRHPTITPSSYPQTQAPIVNNPAFWERVGLEPFGTDTLFYAFYYQQNTYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1947 885 Coils Coil 41 61 - -
Ahy6g1947 885 MobiDBLite consensus disorder prediction 272 302 - -
Ahy6g1947 885 PIRSF NOT_su_3_5 1 885 IPR012270 GO:0006355|GO:0030015
Ahy6g1947 885 PANTHER BNAA10G16600D PROTEIN 1 885 - -
Ahy6g1947 885 MobiDBLite consensus disorder prediction 334 386 - -
Ahy6g1947 885 MobiDBLite consensus disorder prediction 669 697 - -
Ahy6g1947 885 MobiDBLite consensus disorder prediction 110 131 - -
Ahy6g1947 885 PANTHER CCR4 NOT-RELATED 1 885 IPR040168 GO:0030015
Ahy6g1947 885 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Ahy6g1947 885 Pfam NOT2 / NOT3 / NOT5 family 742 879 IPR007282 GO:0006355
Ahy6g1947 885 Coils Coil 132 159 - -
Ahy6g1947 885 MobiDBLite consensus disorder prediction 272 298 - -
Ahy6g1947 885 MobiDBLite consensus disorder prediction 591 615 - -
Ahy6g1947 885 Gene3D - 725 880 IPR038635 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1947 Ahy-Chr6 94943718 94951800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1947 K12580 - gmx:100783415 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2278 16 125907164 125915105 Ahy6g1947 6 94943718 94951800 hybridization