Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1888 ATGCCTCAAACAGAGGCTGAGAAATCGCGGCGAGAACTGAGGAAAGAATCCCGTTTGGCAAAGAATGCATCCAAACACCAATCATGGCTTCACCACCAGAAATCTCGAGCTATCAAAAGAAGTAAAGATGATTCGGATAGGAAAACTAAGACAAACTTTGAGCAACCAGTTAGTACTAGTTTTGAGGAAAAAGAGGGTTTAGGGTTTGATTCGGATTCTGAGAAACATGTGACACCTGAAGAGAATGTTGTATCAGTGGCAATTTGTGGCTCTGATACTAAGAAAATGAAGAAGTTGAAGAAGGGTTCTAAGGGAAGTTCCAAGAAGAAGAGTGGCAAAGAGTTTTTTGGGCTGGATGCTGATATAGCTGCGAAGAAGGATCTTGAGTTGGAAAGGAAGCTTTCCAAGAAGCTTAAGGTGAAGGAAGGGAAATTGAGGGGTTTGGATGATGGGCTGAACATATTGCTCGAAGGAATGTTGCCTGCTATGGATTTATTTGGAGAAGAGGATACTCATGGTGCTAGTGAATTGCCGAAGAAAAGGTTGAAGAAGAGCTTGTTGAGTAAGAAGCGTAAGGAGGAAATACTGCCAAATGAAGGGATGGAAGCAGAGACAATAAATGGAGTATTTGAGCTCATGAGAACTTCTGATCAAGATGGAGCATTAGGTGATGTTGCTGATTGTGGAACTGTGAGGAAGAAGCATAAGAAGAGAAAGTTGTTGAGACAAGAGCAAGAAGATAATGTGGTGGATGATGATGTGTGCATATCGAATACTGTAGAATCCGTGGCAATGGAGGTGGCATCAGAGGCAATGGAGGTGGCATCAGAGCATGTTTCTGCTGAAGTTCCAGCAAAGAAAGAAAAGGGAAAATATATTGCACCTCACTTGAGAGCTCGTGCTGGAAATGAACCTGAAGAGCATACTCAGATACGAAGACGTATACGAGGAGAATTGTCGGCGATCTTTCAGTCTGTTGCACGTAGTGTTGCTTCACACATTATGATTGAGGAGGCTTTGGCATCATGCTCAGGTGGGCCACGGGGCAATGAACAGTACGCTGCTGTTTTTGCTGCATTTGTTGCAGGGATGGCCTGTTTAGTTGGTGTTGACTTCAGTGCAAAGTTTATGGCATCCTTTGCCAAATGCTTTGAGGATGAGTACCTTAAAGAGGATAATCTCTCTCTGCGGAATCTTACACTTCTCTTATCCTATTTATGCATATTTGGGGTCTGTTCTAGTGATTTAATATATGACTTTCTAGTCATGTTGAGCAAGCGTTTGACCGAGATAGATGTCTCTATCATATTGGCAGTCCTACAATGTTGTGGAATGAAAATTAGGGCTGATGATCCAATTTCCATGAAAAATTTTATCGTTAGTGTTCAGAAGACAACAAATGACCTGAAGGCTTCCTCCAGAGATAATCATGAAAAGGGAAATAGTAAAAGAATGGAGTTCATGCTTGAAACCATATGTGACATCAAGAACAACAAGAAAAGACAAAAGGAGGACCCTGCACACCACACTCGGATTAAGAAGTGGTTGCAGAAGTTAAGAGTGGATGACATTTTACTTAGAGGTCTTAAATGGAGCAAGTTACTTGATCCTGATAAGAAGGGTCAGTGGTGGTTAACTGGGGATTTGGCTTCTGCAACAGATAATGTTGAAGAAGTTGCTAACAGAATAGACAAAGATGTTCTTGAAACACAACGAATGCTTCAGCTTGCTGCTGCACAAAAGATGAACACAGATGCCAGAAGAGCAATCTTCTGTATAATAATGAGTGGTGAGGACTATATTGATGCATTTGAGAAGCTTCTTCGATTGGAATTACCTGGGAAGCAGGACAGAGATATAATGCGGGTTCTTCTCGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACGGTGCTGGCGACGAAGTTGTGCGAGCATGACAAAAATCACAAGTTTACCCTGCAGTTTTGCATTTGGGACCACTTTAAGGAACTTGATTCAATGCAGCTTATGAGGTCAATGCACCTTGCCAAATTTGTGGTTGAAATGGTTTCCTCTTTCACCCTCTCCCTTGCCGTGTTGAAGACTGTGGAGCTCAGTGATCTCAACCTGTTATCCCCCAGAAGAGTTATGCATTTCCGCATGCTGTTTGAGGCCATCTTCGAGTACCCCGATAGCACTGTCTGGAATGTATTCACACGTGTGGCCGTGGCCCCTGAACTCGAGGGTCTTCGACAAGGCATTGAATTCTTCGGTAAAGAGTACATTGTCAAATTCAACAAAGATCTAAATCAGAAGTTTAAGTTGGTAAAAAGAGCCCTTAATAATGTGGAAGGAGTTTTGATGTGA 2355 0.4217 MPQTEAEKSRRELRKESRLAKNASKHQSWLHHQKSRAIKRSKDDSDRKTKTNFEQPVSTSFEEKEGLGFDSDSEKHVTPEENVVSVAICGSDTKKMKKLKKGSKGSSKKKSGKEFFGLDADIAAKKDLELERKLSKKLKVKEGKLRGLDDGLNILLEGMLPAMDLFGEEDTHGASELPKKRLKKSLLSKKRKEEILPNEGMEAETINGVFELMRTSDQDGALGDVADCGTVRKKHKKRKLLRQEQEDNVVDDDVCISNTVESVAMEVASEAMEVASEHVSAEVPAKKEKGKYIAPHLRARAGNEPEEHTQIRRRIRGELSAIFQSVARSVASHIMIEEALASCSGGPRGNEQYAAVFAAFVAGMACLVGVDFSAKFMASFAKCFEDEYLKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLVMLSKRLTEIDVSIILAVLQCCGMKIRADDPISMKNFIVSVQKTTNDLKASSRDNHEKGNSKRMEFMLETICDIKNNKKRQKEDPAHHTRIKKWLQKLRVDDILLRGLKWSKLLDPDKKGQWWLTGDLASATDNVEEVANRIDKDVLETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLLECCLQEKVFNKYYTVLATKLCEHDKNHKFTLQFCIWDHFKELDSMQLMRSMHLAKFVVEMVSSFTLSLAVLKTVELSDLNLLSPRRVMHFRMLFEAIFEYPDSTVWNVFTRVAVAPELEGLRQGIEFFGKEYIVKFNKDLNQKFKLVKRALNNVEGVLM* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1888 784 Pfam MA3 domain 587 688 IPR003891 -
Ahy6g1888 784 MobiDBLite consensus disorder prediction 1 78 - -
Ahy6g1888 784 Gene3D - 278 542 - -
Ahy6g1888 784 ProSiteProfiles MI domain profile. 585 701 IPR003891 -
Ahy6g1888 784 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 1 782 - -
Ahy6g1888 784 SMART ma3_7 586 692 IPR003891 -
Ahy6g1888 784 MobiDBLite consensus disorder prediction 37 51 - -
Ahy6g1888 784 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 1 782 - -
Ahy6g1888 784 Pfam MIF4G domain 352 499 IPR003890 GO:0003723|GO:0005515
Ahy6g1888 784 SMART if4_15 309 499 IPR003890 GO:0003723|GO:0005515
Ahy6g1888 784 MobiDBLite consensus disorder prediction 1 22 - -
Ahy6g1888 784 SUPERFAMILY ARM repeat 351 499 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1888 Ahy-Chr6 92711445 92717783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1888 K17583 - gmx:100780608 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2208 16 122815361 122823016 Ahy6g1888 6 92711445 92717783 hybridization