Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2208 ATGCCTCAAACAGAGGCTGAGAAATCGCGGCGAGAACGGAGGAAAGAATCCCGTTTGGCAAAGAATGCATCCAAACACCAATCATGGCTTCACCACCAGAAATCTCGAGCTATCAAAAGAAGTAAAGATGATTTGGATAGGAAAACTAAGACAAACTTGGAGCAACCAGTTAGTACTAGTTTGGAGGAAAAAGAGGGTTTAGGGTTTGATTCGGATTCTGAGAAACATGTGACAGCTGAAGAGAGTGTTGTATCAGTGGCAATTTGTGGCTCTGATACTAAGAAAATGAAGAAGTTGAAGAAGGGTTCTAAAGGAAGTTCCAGGAAGAAGAGTGGCAAAGAGTTTTTTGGGCTGGATGCTGATATAGCTGCGGAGAAGGATCTTGAGTTGGAAAGGAAGCTTTCCAAGAAGCTTAAGGTGAAGGAAGGGAAATTGAGGGGTTTGGATGATGGGCTGAACATATTGCTCGAAGGAATGTTGCCTGCTATGGATTTATTTGGAGAAGAGGATACTCATGGTGCTAGTGAATTGCCGAAGAAAAGGTTGAAGAGCTTGTTGAGTAAGAAGCATAAGGAGGAAATATTGCCAAATGAAGGGATGGAAGCAGAGACAATAGATGGAGTGTTTGAGCTCATGAGAACATCTGATCAAGATGGAGCATTAGGAGATGTTGCTGATTGTGGAACTGTGAGGAAGAAGCATAAGAAGAGAAAGTTGTTGAGACAAGAGCAAGAAGATAATGTGGTGGATGATGATTTGTGCATATCGAATACTGTAGAATCCGTGGCAATGGAGGTGGCATCAGAGAATGTTTCTGCTGAAGTTCCAGCAAAGAAAGAAAAGGGAAAATATATTGCACCTCACTTGAGAGCTCGTGCTGGAAATGAACCTGAAGAGCATACTCAGATACGAAGACGTATACGAGGACTTCTTAATAGGCTTTCTGAATCTAATGTTGAATCAATTACCGGAGAATTGTCAACAATCTTTCAGTCTGTTGCACGTAGTGTAGCTTCACACATTATGATTGAGGAGGCTTTGGCATCATGCTCAGGTGGGCCACGGGGCAATGAACAGTATGCTGCTGTTTTTGCTGCATTTGTTGCAGGGATGGCCTGTTTAGTTGGTGTTGACTTCAGTGCAAAGTTTATGGCATCCTTTGCCAAATGCTTTGAGGATGAGTACCTTAAAGAGGATAATCTCTCTCTGCGGAATCTTACACTTCTCTTATCCTATTTATGCATATTTGGGGTCTGTTCTAGTGATTTAATATATGACTTTCTAGTCATGTTGAGCAAGCGTTTGACCGAGATAGATGTCTCTATCATATTGGCAGTCCTACAGTGTTGTGGAATGAAAATTAGGGCTGATGATCCGATTTCCATGAAAAATTTTATTGTTAGTGTTCAGAAGACGACAAATGACCTGAAGGCTTCCTCCAGAGATAATCATGAAAAGAGAAATAGTAAAAGAATGGAGTTCATGCTTGAAACCATATGTGACATCAAGAACAACAAGAAAAGACAAAAGGAGGACCCTGCACACCACACTCGGATTAAGAAGTGGTTGCAGAAGTTAAGAGTGGATGATATTTTACTTAGAGGTCTTAAATGGAGCAAGTTACTTGATCCTGATAAGAAGGGTCAGTGGTGGTTAACTGGGGATTTGGCTTCTGCAACAGATAATGTTGAAGAAGTTGCTAACAGAATAGACAAAGATGTTCTTGAAACACAACGAATGCTTCAGCTTGCTGCTGCACAAAAGATGAACACAGATGCCAGAAGAGCAATCTTCTGTATAATAATGAGTGGTGAGGACTATATTGATGCATTTGAGAAGCTTCTTCGATTGGAATTACCTGGGAAGCAGGACAGAGATATAATGCGGGTTCTTCTCGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACGGTGCTGGCGACGAAGTTGTGCGAGCATGACAAAAATCACAAGTTTACCCTGCAGTTTTGCATTTGGGACCACTTTAAGGAACTTGATTCAATGCAGCTTATGAGGTCAATGCACCTTGCCAAATTTGTGGCTGAAATGGTTTCCTCTTTCACCCTCTCCCTTGCAGTGTTGAAGACTGTGGAGCTCAGTGATCTCAACCTGTTATCCCCCAGAAGAGTTATGCATTTCCGCATGCTGTTTGAGGCCATCTTCGAGTACCCCGATAGCACCGTCTGGAATGTATTCACACGTGTGGCCGTGGCCCCTGAACTCGAGGGTCTTCGACAAGGCATTGAATTCTTCGGTAAAGAGTACATTGTCAAATCCAACAAAGATCTAAATCAGAAGTTTAAGTTGGTAAAAAGAGCCCTTAATAATGTGGAAGGAGTTTTGATGTGA 2376 0.4188 MPQTEAEKSRRERRKESRLAKNASKHQSWLHHQKSRAIKRSKDDLDRKTKTNLEQPVSTSLEEKEGLGFDSDSEKHVTAEESVVSVAICGSDTKKMKKLKKGSKGSSRKKSGKEFFGLDADIAAEKDLELERKLSKKLKVKEGKLRGLDDGLNILLEGMLPAMDLFGEEDTHGASELPKKRLKSLLSKKHKEEILPNEGMEAETIDGVFELMRTSDQDGALGDVADCGTVRKKHKKRKLLRQEQEDNVVDDDLCISNTVESVAMEVASENVSAEVPAKKEKGKYIAPHLRARAGNEPEEHTQIRRRIRGLLNRLSESNVESITGELSTIFQSVARSVASHIMIEEALASCSGGPRGNEQYAAVFAAFVAGMACLVGVDFSAKFMASFAKCFEDEYLKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLVMLSKRLTEIDVSIILAVLQCCGMKIRADDPISMKNFIVSVQKTTNDLKASSRDNHEKRNSKRMEFMLETICDIKNNKKRQKEDPAHHTRIKKWLQKLRVDDILLRGLKWSKLLDPDKKGQWWLTGDLASATDNVEEVANRIDKDVLETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLLECCLQEKVFNKYYTVLATKLCEHDKNHKFTLQFCIWDHFKELDSMQLMRSMHLAKFVAEMVSSFTLSLAVLKTVELSDLNLLSPRRVMHFRMLFEAIFEYPDSTVWNVFTRVAVAPELEGLRQGIEFFGKEYIVKSNKDLNQKFKLVKRALNNVEGVLM* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2208 791 Pfam MIF4G domain 305 506 IPR003890 GO:0003723|GO:0005515
Ahy16g2208 791 Gene3D - 269 549 - -
Ahy16g2208 791 Pfam MA3 domain 594 695 IPR003891 -
Ahy16g2208 791 SMART ma3_7 593 699 IPR003891 -
Ahy16g2208 791 SMART if4_15 304 506 IPR003890 GO:0003723|GO:0005515
Ahy16g2208 791 MobiDBLite consensus disorder prediction 37 51 - -
Ahy16g2208 791 MobiDBLite consensus disorder prediction 1 74 - -
Ahy16g2208 791 SUPERFAMILY ARM repeat 297 506 IPR016024 -
Ahy16g2208 791 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 1 789 - -
Ahy16g2208 791 MobiDBLite consensus disorder prediction 1 22 - -
Ahy16g2208 791 ProSiteProfiles MI domain profile. 592 708 IPR003891 -
Ahy16g2208 791 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 1 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2208 Ahy-Chr16 122815361 122823016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2208 K17583 - gmx:100780608 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2208 16 122815361 122823016 Ahy6g1888 6 92711445 92717783 hybridization