Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1837 ATGGCTTCTTGCGCAGGCACAAGATTTGGAAACACAACAAAAATGTCATTGAGAATCATCTTTCAGATCCTTTTCTACTTGCATTTGCTCCTAACAGCAGCCACAGTGATCTTCATCACTGTTTATGGCCTGACCTCGGAATCTGGCGGCCAACATTTCCACCCTTTGAAGTGGTACCCTCCAGTTCTAGCTTCGACGGCATGTGGCGGAGTAATCAGTTTCCTGTGGCAATGGATCACTTTCAGCTACCCAAGAAACGCACTCAAGGCAGCATTTTGGCTAGGTCCGTTGCTAACATGTTTAATGGCTGGGATGTTTGTGTACATAGGCACTGCAACTAGTCTTATAGTGGGATTAGTTTCTTTCTGTTCTGCATTAGCTCAATCCCTCTATGGTTGTTGGGTCAGACCCAGATTCGAATACGCGACAAATATCTTGTCAGTTTCAACAGCTTTTCCACCTGCTAAAACCGGAGTGTCGGTACTCGCGACAATTGTAATTGGAACCCTTTATTGCTGTTTTCTTGTATCCGGGATCGGTGGAGCTACAGCCCTTCAAGACAAATTCAAATTAGCTTTCATTTTCATCTTGGTGATTATGCTGAGCCTGGGATGGACCATGCAGTTTCTCAAGAATGTAATACAACTCACCATTTCAAGGGTCACATATCTGCAGATACTTGGAAACCCCATGGATACTTGTGCCGCGCTTCGTGACAGTATCAATCGTTCTGTTGGATGTATCGCCATTGGCTCAATCCTTATCCCGGTCTTCACTCTCCTCCGCAGTTTTGGACGCTCCATGAGTCTACTTGGAGGAGAAAATGAGATCATGTTTTGCTGTGTTAGTTATTGTATGGGGATGGTAAACGTTCTTCCGAAGTTTGGGAGCCGATGGAGTTTTGTACATATTGGAGTCTATAACAAAGAGTTTGTGGACGCATCTCAAGATACTTGGGAAATCTTCACTGGAGCTAGAATGTTGCCACTCATAGACTCGGATCTAACCGGAGCATTATGTTTCCTTAGCGGAGTAGCTGTAGGTGCATTTTGTTCTATGGTGAGTGGAATTTGGATCCTTGTGATGCATCAGAGCTATGCCCTGGAAGTATCCATTTATGCTTTCTTGATTGGCTATTTCATGTGTCGATTGGCAATGGGGTGGCTACAGGCATGTGTTGCGGCATACTATGTTGCCTACGGAGAGAATCCAGTGAACGATCAATTCGACTCAACAATTCCAGCACGCTTGGAGCAGATTCAAAGATCTCAGGCTCTGTAA 1281 0.4489 MASCAGTRFGNTTKMSLRIIFQILFYLHLLLTAATVIFITVYGLTSESGGQHFHPLKWYPPVLASTACGGVISFLWQWITFSYPRNALKAAFWLGPLLTCLMAGMFVYIGTATSLIVGLVSFCSALAQSLYGCWVRPRFEYATNILSVSTAFPPAKTGVSVLATIVIGTLYCCFLVSGIGGATALQDKFKLAFIFILVIMLSLGWTMQFLKNVIQLTISRVTYLQILGNPMDTCAALRDSINRSVGCIAIGSILIPVFTLLRSFGRSMSLLGGENEIMFCCVSYCMGMVNVLPKFGSRWSFVHIGVYNKEFVDASQDTWEIFTGARMLPLIDSDLTGALCFLSGVAVGAFCSMVSGIWILVMHQSYALEVSIYAFLIGYFMCRLAMGWLQACVAAYYVAYGENPVNDQFDSTIPARLEQIQRSQAL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1837 426 Pfam Plasma-membrane choline transporter 122 404 IPR007603 GO:0022857|GO:0055085
Ahy6g1837 426 PANTHER F20H23.27 PROTEIN-RELATED 14 424 - -
Ahy6g1837 426 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 14 424 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1837 Ahy-Chr6 90466069 90468446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1837 - - aip:107648347 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2135 16 119556961 119558368 Ahy6g1837 6 90466069 90468446 hybridization