Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2135 ATGGCTTCTTGCGCAGGCACAAGATTTGGAAACACAACAAAAATGTCATTGAGAATCATCTTTCAGATCCTTTTCTACTTGCATTTGCTCCTAACAGCAGCCACAGTGATCTTCATCACTGTTTATGGCCTGACCTCGGAATCTGGCGGCCAGCATTTCCACCCTATGAAGTGGTACCCTCCAGTTCTAGCTTCGACGGCATGTGGCGGAATAATCGGTTTCATGTGGCAATGGATCACTTTCAGCTACCCAAGAAACGCACTCAAGGCAGCATTTTGGCTAGGTCCCCTGCTAACATGTTTAATGGCTGGGATGTTTGTGTACATGGGCACAGCAACTAGTCTTATAGTGGGATTAGTTTCCTTCTGTTCTGCATTAGCTCAATCCCTCTATGGTTGTTGGGCCAGACCCAGATTCGAATATGCGACGAATATCTTGTCAGTTTCAACAGCTTTTCCACCTGCTAAAACCAGAGTGTTGGTACTCGCGACAATTGTAATTGGAACCCTTTATTGCTGTTTTCTTGTATCCGGGATCGGTGGAGCTACAGCCCTTCAAGACAAATTCAAATTGGCTTTCATTTTCATCTTGGTGATTATGCTGAGCCTGGGATGGACCATGCAGTTTCTCAAGAATGTAATACAACTCACCATTTCAAGGGTCACATATCTGCAGATACTTGGAAATCCCATGGATACTTATGAGGCGCTTCGTGACAGTATCAATCGTTCTGTTGGATGTATCGCCATTGGCTCAATCCTTCTCCCAGTCTTCACTCTCTTCCGCGGTTTTGGACGCTCGATGAGTCTACTTGGAGGAGAAGATGAGATCCTGTTTTGCTGTGTTAGTTCTTATATGGGGATGGTAAACGTTCTTCCGAAGTTTGGGAACCGATGGAGTTTTGTACATATTGGAGTCTATAACAAAGAGTTTGTGGACGCATCTGGTGATATTTGGGAAATATTCACTAGAGCTAGAATGTTGCCACTCATAGACTCGGATCTAACCGGAGCATTATGTTTCCTTAGCGGAGTAGCTGTAGGTGCATTTTGTTCTATGGTGTGTGGAATTTGGATCCTTGTGATGCATCAGAGCTATGCCCTGGAAGTATCCATTTATGCTTTCTTGATTGGCTATTTCATGTGTCGATTGGCAATGGGGTGGCTACAGGCATGTGTTGCGGCATACTATGTTGCCTACGGAGAGAATCCGGAGAACGATCAATTCGACTCAACAATTCCAGCACGCTTGGAGCAGATTCAAAGATCTCAAGCTCTGCAACTATTCTGA 1290 0.4481 MASCAGTRFGNTTKMSLRIIFQILFYLHLLLTAATVIFITVYGLTSESGGQHFHPMKWYPPVLASTACGGIIGFMWQWITFSYPRNALKAAFWLGPLLTCLMAGMFVYMGTATSLIVGLVSFCSALAQSLYGCWARPRFEYATNILSVSTAFPPAKTRVLVLATIVIGTLYCCFLVSGIGGATALQDKFKLAFIFILVIMLSLGWTMQFLKNVIQLTISRVTYLQILGNPMDTYEALRDSINRSVGCIAIGSILLPVFTLFRGFGRSMSLLGGEDEILFCCVSSYMGMVNVLPKFGNRWSFVHIGVYNKEFVDASGDIWEIFTRARMLPLIDSDLTGALCFLSGVAVGAFCSMVCGIWILVMHQSYALEVSIYAFLIGYFMCRLAMGWLQACVAAYYVAYGENPENDQFDSTIPARLEQIQRSQALQLF* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2135 429 PANTHER F20H23.27 PROTEIN-RELATED 14 424 - -
Ahy16g2135 429 Pfam Plasma-membrane choline transporter 121 405 IPR007603 GO:0022857|GO:0055085
Ahy16g2135 429 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 14 424 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2135 Ahy-Chr16 119556961 119558368 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2135 - - aip:107648347 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2135 16 119556961 119558368 Ahy6g1837 6 90466069 90468446 hybridization