Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1818 ATGGAAGCTCAACAAATCCTCTCTAGGTTTTGCCCCAAACCCTCGTCACTCCTGCTACCTTCTCATAAAAAGCTTCATACTTTACCTTGTGTTGGGCTCAAGAACCTTGGGATTCAGAGATTGGGGTGCAGTTACACTGAGGGAAAGAAGAAGAGGGTCTTTTGTGTAAGGAGGACGATAGGAGAAGAAGCAGCGGAGGTGAAAGTTGGGGCCACTATGCCGGCGAGGAGGAAGAAGCTGGCAGTGTTCGTGTCCGGTGGAGGGTCCAACTTCAAGTCCATTCACGAGGCTTCGTTGAAGGGTTTACTCCATGGTGATGTTCTTGTTTTGGTCACAAATAAACATGATTGTGGAGGTGCTGAGTATGCAAGAAATAATGGTATCCCAGTTGTTTTGTTCCCTAAAGTAAAGGATGGATCCGATGGGCTATCTCCAAGTGAGCTTGTTGACACACTAAGGAGTTTCCAAGTTGATTTTATTCTTTTAGCTGGATTCCTCAAACTTATACCTGTTGAATTGATTCAGGCTTATGAAAAGTCCATATTAAACATTCATCCATCACTTCTTCCAGCTTTTGGAGGCAAAGGATACTATGGTCTGAAGGTGCACAAAGCAGTAATTGCTTCGGGCGCAAGATATTCAGGTCCTACAATTCATTTCGTTGACGAACATTATGACACGGGGCGTATCCTTGCTCAACGTGCTGTCCCTGTACTGGCTAATGACACTGCAGAGGAGTTGGCTTCCAGGGTTCTCAAGGAGGAACACCGGTTATATGTGGAGGTGGTCGAAGCTTTGTGCGAAGAGCGTATAGTTTGGAGGGAAGACGGTGTCCCTCTCATTCGAAGCAAAGATAACCCCAATGAGTTCTGCTAA 876 0.4589 MEAQQILSRFCPKPSSLLLPSHKKLHTLPCVGLKNLGIQRLGCSYTEGKKKRVFCVRRTIGEEAAEVKVGATMPARRKKLAVFVSGGGSNFKSIHEASLKGLLHGDVLVLVTNKHDCGGAEYARNNGIPVVLFPKVKDGSDGLSPSELVDTLRSFQVDFILLAGFLKLIPVELIQAYEKSILNIHPSLLPAFGGKGYYGLKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRAVPVLANDTAEELASRVLKEEHRLYVEVVEALCEERIVWREDGVPLIRSKDNPNEFC* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1818 291 SUPERFAMILY Formyltransferase 78 279 IPR036477 GO:0009058
Ahy6g1818 291 Gene3D - 61 289 - -
Ahy6g1818 291 TIGRFAM PurN: phosphoribosylglycinamide formyltransferase 78 271 IPR004607 GO:0004644|GO:0006189
Ahy6g1818 291 ProSitePatterns Phosphoribosylglycinamide formyltransferase active site. 215 238 IPR001555 -
Ahy6g1818 291 Hamap Phosphoribosylglycinamide formyltransferase [purN]. 79 269 IPR004607 GO:0004644|GO:0006189
Ahy6g1818 291 Pfam Formyl transferase 78 263 IPR002376 GO:0009058
Ahy6g1818 291 PANTHER PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 67 283 - -
Ahy6g1818 291 CDD FMT_core_GART 79 266 IPR004607 GO:0004644|GO:0006189
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1818 Ahy-Chr6 88625746 88630258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1818 K00601 - gmx:548052 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2109 16 117233658 117238182 Ahy6g1818 6 88625746 88630258 hybridization